Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
APOC3P02656 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOC3P02656 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOC3P02656 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
APOC3P02656 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC12.63□□□□□ -0.39
APOC3P02656 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC12.63□□□□□ -0.39
APOC3P02656 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
APOC3P02656 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOC3P02656 RBMS1-201ENST00000348849 4273 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOC3P02656 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOC3P02656 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOC3P02656 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC12.63□□□□□ -0.39
APOC3P02656 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC12.63□□□□□ -0.39
APOC3P02656 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
APOC3P02656 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
APOC3P02656 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
APOC3P02656 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
APOC3P02656 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOC3P02656 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC12.63□□□□□ -0.39
APOC3P02656 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOC3P02656 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
APOC3P02656 AC009336.1-201ENST00000608941 1553 ntBASIC12.63□□□□□ -0.39
APOC3P02656 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOC3P02656 BAHCC1-201ENST00000307745 10342 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
APOC3P02656 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC12.63□□□□□ -0.39
APOC3P02656 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
APOC3P02656 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC12.63□□□□□ -0.39
APOC3P02656 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOC3P02656 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC12.63□□□□□ -0.39
APOC3P02656 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
APOC3P02656 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOC3P02656 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
APOC3P02656 AC015818.8-201ENST00000587907 1519 ntBASIC12.62□□□□□ -0.39
APOC3P02656 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
APOC3P02656 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC12.62□□□□□ -0.39
APOC3P02656 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
APOC3P02656 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOC3P02656 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC12.62□□□□□ -0.39
APOC3P02656 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC12.62□□□□□ -0.39
APOC3P02656 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
APOC3P02656 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
APOC3P02656 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC12.62□□□□□ -0.39
APOC3P02656 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
APOC3P02656 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC12.62□□□□□ -0.39
APOC3P02656 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOC3P02656 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
APOC3P02656 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOC3P02656 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOC3P02656 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOC3P02656 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOC3P02656 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC12.62□□□□□ -0.39
APOC3P02656 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
APOC3P02656 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
APOC3P02656 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
APOC3P02656 AC008406.3-201ENST00000620001 1374 ntBASIC12.62□□□□□ -0.39
APOC3P02656 REXO1L1P-201ENST00000379010 6598 ntBASIC12.62□□□□□ -0.39
APOC3P02656 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC12.62□□□□□ -0.39
APOC3P02656 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOC3P02656 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOC3P02656 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
APOC3P02656 NME2-201ENST00000393183 568 ntTSL 2 BASIC12.62□□□□□ -0.39
APOC3P02656 MIPEPP3-201ENST00000412105 444 ntBASIC12.62□□□□□ -0.39
APOC3P02656 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC12.62□□□□□ -0.39
APOC3P02656 SEC1P-202ENST00000473944 940 ntBASIC12.62□□□□□ -0.39
APOC3P02656 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC12.62□□□□□ -0.39
APOC3P02656 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC12.62□□□□□ -0.39
APOC3P02656 AL353708.3-201ENST00000610272 989 ntBASIC12.62□□□□□ -0.39
APOC3P02656 CR392000.1-201ENST00000624770 1228 ntBASIC12.62□□□□□ -0.39
APOC3P02656 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOC3P02656 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOC3P02656 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC12.62□□□□□ -0.39
APOC3P02656 AC022497.1-201ENST00000624916 3691 ntBASIC12.62□□□□□ -0.39
APOC3P02656 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOC3P02656 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
APOC3P02656 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC12.62□□□□□ -0.39
APOC3P02656 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOC3P02656 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC12.62□□□□□ -0.39
APOC3P02656 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC12.62□□□□□ -0.39
APOC3P02656 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
APOC3P02656 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
APOC3P02656 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
APOC3P02656 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOC3P02656 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
APOC3P02656 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC12.62□□□□□ -0.39
APOC3P02656 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOC3P02656 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOC3P02656 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOC3P02656 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
APOC3P02656 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC12.61□□□□□ -0.39
APOC3P02656 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC12.61□□□□□ -0.39
APOC3P02656 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
APOC3P02656 AP001972.5-201ENST00000624624 2338 ntBASIC12.61□□□□□ -0.39
APOC3P02656 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
APOC3P02656 AL049757.1-201ENST00000616842 1596 ntBASIC12.61□□□□□ -0.39
APOC3P02656 AC023090.2-201ENST00000625182 2110 ntBASIC12.61□□□□□ -0.39
APOC3P02656 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
APOC3P02656 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
APOC3P02656 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
APOC3P02656 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
APOC3P02656 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms