Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
PHF1O43189 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PHF1O43189 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PHF1O43189 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PHF1O43189 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC13.7□□□□□ -0.22
PHF1O43189 SBF1P1-201ENST00000444527 5631 ntBASIC13.7□□□□□ -0.22
PHF1O43189 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC13.69□□□□□ -0.22
PHF1O43189 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
PHF1O43189 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
PHF1O43189 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PHF1O43189 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PHF1O43189 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
PHF1O43189 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
PHF1O43189 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC13.69□□□□□ -0.22
PHF1O43189 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PHF1O43189 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PHF1O43189 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC13.69□□□□□ -0.22
PHF1O43189 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC13.69□□□□□ -0.22
PHF1O43189 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC13.69□□□□□ -0.22
PHF1O43189 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PHF1O43189 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC13.69□□□□□ -0.22
PHF1O43189 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
PHF1O43189 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PHF1O43189 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
PHF1O43189 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC13.69□□□□□ -0.22
PHF1O43189 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC13.69□□□□□ -0.22
PHF1O43189 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PHF1O43189 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PHF1O43189 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC13.69□□□□□ -0.22
PHF1O43189 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC13.69□□□□□ -0.22
PHF1O43189 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC13.69□□□□□ -0.22
PHF1O43189 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
PHF1O43189 AC241585.1-201ENST00000433527 519 ntBASIC13.69□□□□□ -0.22
PHF1O43189 U91328.1-201ENST00000437528 223 ntBASIC13.69□□□□□ -0.22
PHF1O43189 SPDYE14P-201ENST00000442619 822 ntBASIC13.69□□□□□ -0.22
PHF1O43189 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PHF1O43189 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC13.69□□□□□ -0.22
PHF1O43189 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC13.69□□□□□ -0.22
PHF1O43189 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC13.69□□□□□ -0.22
PHF1O43189 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC13.69□□□□□ -0.22
PHF1O43189 NKG7-205ENST00000600427 520 ntTSL 3 BASIC13.69□□□□□ -0.22
PHF1O43189 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC13.69□□□□□ -0.22
PHF1O43189 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
PHF1O43189 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC13.69□□□□□ -0.22
PHF1O43189 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PHF1O43189 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC13.69□□□□□ -0.22
PHF1O43189 LINC01144-201ENST00000626198 1710 ntBASIC13.69□□□□□ -0.22
PHF1O43189 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PHF1O43189 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
PHF1O43189 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PHF1O43189 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PHF1O43189 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PHF1O43189 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PHF1O43189 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PHF1O43189 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
PHF1O43189 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
PHF1O43189 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC13.69□□□□□ -0.22
PHF1O43189 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC13.69□□□□□ -0.22
PHF1O43189 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PHF1O43189 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
PHF1O43189 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC13.69□□□□□ -0.22
PHF1O43189 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC13.69□□□□□ -0.22
PHF1O43189 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
PHF1O43189 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PHF1O43189 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PHF1O43189 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PHF1O43189 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PHF1O43189 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
PHF1O43189 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
PHF1O43189 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
PHF1O43189 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC13.68□□□□□ -0.22
PHF1O43189 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC13.68□□□□□ -0.22
PHF1O43189 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC13.68□□□□□ -0.22
PHF1O43189 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC13.68□□□□□ -0.22
PHF1O43189 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC13.68□□□□□ -0.22
PHF1O43189 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
PHF1O43189 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
PHF1O43189 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
PHF1O43189 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PHF1O43189 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
PHF1O43189 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PHF1O43189 MIR346-201ENST00000362234 95 ntBASIC13.68□□□□□ -0.22
PHF1O43189 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC13.68□□□□□ -0.22
PHF1O43189 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PHF1O43189 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
PHF1O43189 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC13.68□□□□□ -0.22
PHF1O43189 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PHF1O43189 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PHF1O43189 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC13.68□□□□□ -0.22
PHF1O43189 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC13.68□□□□□ -0.22
PHF1O43189 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC13.68□□□□□ -0.22
PHF1O43189 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC13.68□□□□□ -0.22
PHF1O43189 PPP6R2P1-201ENST00000450880 1275 ntBASIC13.68□□□□□ -0.22
PHF1O43189 AC105233.2-201ENST00000523697 349 ntBASIC13.68□□□□□ -0.22
PHF1O43189 AF228730.5-201ENST00000530288 346 ntBASIC13.68□□□□□ -0.22
PHF1O43189 ALG1L8P-201ENST00000533887 760 ntBASIC13.68□□□□□ -0.22
PHF1O43189 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PHF1O43189 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC13.68□□□□□ -0.22
PHF1O43189 HILS1-202ENST00000545329 423 ntBASIC13.68□□□□□ -0.22
PHF1O43189 SSH2-211ENST00000590153 570 ntTSL 4 BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms