Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.93□□□□□ -0.02
UPK1AO00322 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.93□□□□□ -0.02
UPK1AO00322 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.93□□□□□ -0.02
UPK1AO00322 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.93□□□□□ -0.02
UPK1AO00322 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.93□□□□□ -0.02
UPK1AO00322 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
UPK1AO00322 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.93□□□□□ -0.02
UPK1AO00322 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.93□□□□□ -0.02
UPK1AO00322 GRK6P1-201ENST00000400595 1711 ntBASIC14.93□□□□□ -0.02
UPK1AO00322 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
UPK1AO00322 EEF1DP4-201ENST00000446006 880 ntBASIC14.93□□□□□ -0.02
UPK1AO00322 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.93□□□□□ -0.02
UPK1AO00322 AC007967.4-201ENST00000614700 386 ntBASIC14.93□□□□□ -0.02
UPK1AO00322 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.93□□□□□ -0.02
UPK1AO00322 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.93□□□□□ -0.02
UPK1AO00322 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
UPK1AO00322 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
UPK1AO00322 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
UPK1AO00322 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
UPK1AO00322 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
UPK1AO00322 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
UPK1AO00322 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
UPK1AO00322 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
UPK1AO00322 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.93□□□□□ -0.02
UPK1AO00322 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
UPK1AO00322 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
UPK1AO00322 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
UPK1AO00322 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
UPK1AO00322 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
UPK1AO00322 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
UPK1AO00322 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.92□□□□□ -0.02
UPK1AO00322 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.92□□□□□ -0.02
UPK1AO00322 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.92□□□□□ -0.02
UPK1AO00322 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
UPK1AO00322 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
UPK1AO00322 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.92□□□□□ -0.02
UPK1AO00322 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14.92□□□□□ -0.02
UPK1AO00322 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC14.92□□□□□ -0.02
UPK1AO00322 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.92□□□□□ -0.02
UPK1AO00322 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.92□□□□□ -0.02
UPK1AO00322 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.92□□□□□ -0.02
UPK1AO00322 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
UPK1AO00322 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.92□□□□□ -0.02
UPK1AO00322 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.92□□□□□ -0.02
UPK1AO00322 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.92□□□□□ -0.02
UPK1AO00322 MIR4453-201ENST00000584019 89 ntBASIC14.92□□□□□ -0.02
UPK1AO00322 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.92□□□□□ -0.02
UPK1AO00322 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC14.92□□□□□ -0.02
UPK1AO00322 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC14.92□□□□□ -0.02
UPK1AO00322 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.92□□□□□ -0.02
UPK1AO00322 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.92□□□□□ -0.02
UPK1AO00322 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.92□□□□□ -0.02
UPK1AO00322 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
UPK1AO00322 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
UPK1AO00322 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.92□□□□□ -0.02
UPK1AO00322 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.92□□□□□ -0.02
UPK1AO00322 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.92□□□□□ -0.02
UPK1AO00322 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
UPK1AO00322 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
UPK1AO00322 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.92□□□□□ -0.02
UPK1AO00322 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.92□□□□□ -0.02
UPK1AO00322 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.92□□□□□ -0.02
UPK1AO00322 AC126365.1-201ENST00000578585 1514 ntBASIC14.92□□□□□ -0.02
UPK1AO00322 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
UPK1AO00322 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
UPK1AO00322 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
UPK1AO00322 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
UPK1AO00322 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
UPK1AO00322 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
UPK1AO00322 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
UPK1AO00322 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.91□□□□□ -0.02
UPK1AO00322 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.91□□□□□ -0.02
UPK1AO00322 FGD5P1-202ENST00000614866 2498 ntBASIC14.91□□□□□ -0.02
UPK1AO00322 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
UPK1AO00322 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.91□□□□□ -0.02
UPK1AO00322 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
UPK1AO00322 CICP4-201ENST00000447359 2812 ntBASIC14.91□□□□□ -0.02
UPK1AO00322 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
UPK1AO00322 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.91□□□□□ -0.02
UPK1AO00322 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.91□□□□□ -0.02
UPK1AO00322 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.91□□□□□ -0.02
UPK1AO00322 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
UPK1AO00322 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
UPK1AO00322 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
UPK1AO00322 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.91□□□□□ -0.02
UPK1AO00322 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
UPK1AO00322 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
UPK1AO00322 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.91□□□□□ -0.02
UPK1AO00322 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
UPK1AO00322 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC14.91□□□□□ -0.02
UPK1AO00322 DAD1-205ENST00000543337 501 ntTSL 3 BASIC14.91□□□□□ -0.02
UPK1AO00322 AL512356.2-201ENST00000546955 174 ntBASIC14.91□□□□□ -0.02
UPK1AO00322 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.91□□□□□ -0.02
UPK1AO00322 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC14.91□□□□□ -0.02
UPK1AO00322 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
UPK1AO00322 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
UPK1AO00322 AL450472.2-201ENST00000603663 1156 ntBASIC14.91□□□□□ -0.02
UPK1AO00322 MIR6080-201ENST00000617359 66 ntBASIC14.91□□□□□ -0.02
UPK1AO00322 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.91□□□□□ -0.02
UPK1AO00322 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms