Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
TBC1D3FA6NER0 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
TBC1D3FA6NER0 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TBC1D3FA6NER0 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TBC1D3FA6NER0 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TBC1D3FA6NER0 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.63■□□□□ 0.09
TBC1D3FA6NER0 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
TBC1D3FA6NER0 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC15.63■□□□□ 0.09
TBC1D3FA6NER0 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC15.63■□□□□ 0.09
TBC1D3FA6NER0 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.63■□□□□ 0.09
TBC1D3FA6NER0 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TBC1D3FA6NER0 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TBC1D3FA6NER0 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TBC1D3FA6NER0 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TBC1D3FA6NER0 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TBC1D3FA6NER0 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TBC1D3FA6NER0 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TBC1D3FA6NER0 MTHFR-217ENST00000641820 1569 ntBASIC15.62■□□□□ 0.09
TBC1D3FA6NER0 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
TBC1D3FA6NER0 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TBC1D3FA6NER0 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TBC1D3FA6NER0 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TBC1D3FA6NER0 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
TBC1D3FA6NER0 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.62■□□□□ 0.09
TBC1D3FA6NER0 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.62■□□□□ 0.09
TBC1D3FA6NER0 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC15.62■□□□□ 0.09
TBC1D3FA6NER0 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TBC1D3FA6NER0 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC15.62■□□□□ 0.09
TBC1D3FA6NER0 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
TBC1D3FA6NER0 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TBC1D3FA6NER0 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TBC1D3FA6NER0 AL133267.1-201ENST00000398220 340 ntBASIC15.62■□□□□ 0.09
TBC1D3FA6NER0 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TBC1D3FA6NER0 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC15.62■□□□□ 0.09
TBC1D3FA6NER0 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TBC1D3FA6NER0 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC15.62■□□□□ 0.09
TBC1D3FA6NER0 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
TBC1D3FA6NER0 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC15.62■□□□□ 0.09
TBC1D3FA6NER0 AL355864.2-201ENST00000447420 863 ntBASIC15.62■□□□□ 0.09
TBC1D3FA6NER0 KLF2P4-201ENST00000451959 1225 ntBASIC15.62■□□□□ 0.09
TBC1D3FA6NER0 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.62■□□□□ 0.09
TBC1D3FA6NER0 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
TBC1D3FA6NER0 RPS24-214ENST00000613865 538 ntTSL 5 BASIC15.62■□□□□ 0.09
TBC1D3FA6NER0 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TBC1D3FA6NER0 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
TBC1D3FA6NER0 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TBC1D3FA6NER0 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TBC1D3FA6NER0 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TBC1D3FA6NER0 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TBC1D3FA6NER0 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TBC1D3FA6NER0 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TBC1D3FA6NER0 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TBC1D3FA6NER0 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TBC1D3FA6NER0 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
TBC1D3FA6NER0 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.62■□□□□ 0.09
TBC1D3FA6NER0 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TBC1D3FA6NER0 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TBC1D3FA6NER0 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
TBC1D3FA6NER0 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TBC1D3FA6NER0 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
TBC1D3FA6NER0 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
TBC1D3FA6NER0 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TBC1D3FA6NER0 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
TBC1D3FA6NER0 TP73-209ENST00000603362 1668 ntTSL 5 BASIC15.61■□□□□ 0.09
TBC1D3FA6NER0 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
TBC1D3FA6NER0 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
TBC1D3FA6NER0 FLII-221ENST00000578558 2377 ntTSL 5 BASIC15.61■□□□□ 0.09
TBC1D3FA6NER0 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.61■□□□□ 0.09
TBC1D3FA6NER0 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TBC1D3FA6NER0 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
TBC1D3FA6NER0 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TBC1D3FA6NER0 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
TBC1D3FA6NER0 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC15.61■□□□□ 0.09
TBC1D3FA6NER0 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TBC1D3FA6NER0 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC15.61■□□□□ 0.09
TBC1D3FA6NER0 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC15.61■□□□□ 0.09
TBC1D3FA6NER0 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TBC1D3FA6NER0 BAATP1-201ENST00000412284 1225 ntBASIC15.61■□□□□ 0.09
TBC1D3FA6NER0 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC15.61■□□□□ 0.09
TBC1D3FA6NER0 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC15.61■□□□□ 0.09
TBC1D3FA6NER0 CTBP2P5-201ENST00000454986 1264 ntBASIC15.61■□□□□ 0.09
TBC1D3FA6NER0 AC119751.2-201ENST00000504529 210 ntBASIC15.61■□□□□ 0.09
TBC1D3FA6NER0 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
TBC1D3FA6NER0 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC15.61■□□□□ 0.09
TBC1D3FA6NER0 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.61■□□□□ 0.09
TBC1D3FA6NER0 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC15.61■□□□□ 0.09
TBC1D3FA6NER0 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.61■□□□□ 0.09
TBC1D3FA6NER0 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC15.61■□□□□ 0.09
TBC1D3FA6NER0 MIR4313-201ENST00000580760 101 ntBASIC15.61■□□□□ 0.09
TBC1D3FA6NER0 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TBC1D3FA6NER0 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.61■□□□□ 0.09
TBC1D3FA6NER0 MIR6799-201ENST00000620297 69 ntBASIC15.61■□□□□ 0.09
TBC1D3FA6NER0 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TBC1D3FA6NER0 PDIA3P1-201ENST00000471856 1510 ntBASIC15.61■□□□□ 0.09
TBC1D3FA6NER0 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TBC1D3FA6NER0 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TBC1D3FA6NER0 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
TBC1D3FA6NER0 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TBC1D3FA6NER0 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TBC1D3FA6NER0 AC134312.5-201ENST00000568031 1313 ntBASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms