Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC12.29□□□□□ -0.44
TRAV5A0A0B4J249 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
TRAV5A0A0B4J249 RDX-218ENST00000544551 4117 ntTSL 2 BASIC12.29□□□□□ -0.44
TRAV5A0A0B4J249 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRAV5A0A0B4J249 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRAV5A0A0B4J249 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC12.29□□□□□ -0.44
TRAV5A0A0B4J249 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
TRAV5A0A0B4J249 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRAV5A0A0B4J249 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRAV5A0A0B4J249 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRAV5A0A0B4J249 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRAV5A0A0B4J249 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRAV5A0A0B4J249 AC117489.1-201ENST00000625169 3217 ntBASIC12.29□□□□□ -0.44
TRAV5A0A0B4J249 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRAV5A0A0B4J249 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
TRAV5A0A0B4J249 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TRAV5A0A0B4J249 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRAV5A0A0B4J249 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC12.29□□□□□ -0.44
TRAV5A0A0B4J249 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC12.29□□□□□ -0.44
TRAV5A0A0B4J249 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC12.29□□□□□ -0.44
TRAV5A0A0B4J249 FGD5P1-202ENST00000614866 2498 ntBASIC12.29□□□□□ -0.44
TRAV5A0A0B4J249 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC12.29□□□□□ -0.44
TRAV5A0A0B4J249 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TRAV5A0A0B4J249 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRAV5A0A0B4J249 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
TRAV5A0A0B4J249 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TRAV5A0A0B4J249 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRAV5A0A0B4J249 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRAV5A0A0B4J249 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRAV5A0A0B4J249 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC12.28□□□□□ -0.44
TRAV5A0A0B4J249 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC12.28□□□□□ -0.44
TRAV5A0A0B4J249 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
TRAV5A0A0B4J249 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TRAV5A0A0B4J249 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC12.28□□□□□ -0.44
TRAV5A0A0B4J249 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TRAV5A0A0B4J249 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TRAV5A0A0B4J249 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
TRAV5A0A0B4J249 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRAV5A0A0B4J249 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRAV5A0A0B4J249 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRAV5A0A0B4J249 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRAV5A0A0B4J249 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRAV5A0A0B4J249 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
TRAV5A0A0B4J249 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRAV5A0A0B4J249 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TRAV5A0A0B4J249 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TRAV5A0A0B4J249 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRAV5A0A0B4J249 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRAV5A0A0B4J249 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRAV5A0A0B4J249 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRAV5A0A0B4J249 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC12.28□□□□□ -0.44
TRAV5A0A0B4J249 AC140658.5-201ENST00000438532 169 ntBASIC12.28□□□□□ -0.44
TRAV5A0A0B4J249 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC12.28□□□□□ -0.44
TRAV5A0A0B4J249 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC12.28□□□□□ -0.44
TRAV5A0A0B4J249 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC12.28□□□□□ -0.44
TRAV5A0A0B4J249 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC12.28□□□□□ -0.44
TRAV5A0A0B4J249 CD63-210ENST00000550776 870 ntTSL 5 BASIC12.28□□□□□ -0.44
TRAV5A0A0B4J249 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC12.28□□□□□ -0.44
TRAV5A0A0B4J249 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC12.28□□□□□ -0.44
TRAV5A0A0B4J249 PAM16-215ENST00000577031 548 ntTSL 4 BASIC12.28□□□□□ -0.44
TRAV5A0A0B4J249 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC12.28□□□□□ -0.44
TRAV5A0A0B4J249 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC12.28□□□□□ -0.44
TRAV5A0A0B4J249 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TRAV5A0A0B4J249 AC007064.4-201ENST00000637740 555 ntBASIC12.28□□□□□ -0.44
TRAV5A0A0B4J249 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
TRAV5A0A0B4J249 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
TRAV5A0A0B4J249 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRAV5A0A0B4J249 ST20-AS1-201ENST00000560255 4223 ntBASIC12.28□□□□□ -0.44
TRAV5A0A0B4J249 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRAV5A0A0B4J249 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
TRAV5A0A0B4J249 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
TRAV5A0A0B4J249 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC12.28□□□□□ -0.44
TRAV5A0A0B4J249 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRAV5A0A0B4J249 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRAV5A0A0B4J249 AL390755.1-201ENST00000623716 2027 ntBASIC12.28□□□□□ -0.44
TRAV5A0A0B4J249 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRAV5A0A0B4J249 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC12.28□□□□□ -0.44
TRAV5A0A0B4J249 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRAV5A0A0B4J249 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC12.28□□□□□ -0.44
TRAV5A0A0B4J249 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TRAV5A0A0B4J249 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
TRAV5A0A0B4J249 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC12.28□□□□□ -0.44
TRAV5A0A0B4J249 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
TRAV5A0A0B4J249 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRAV5A0A0B4J249 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC12.28□□□□□ -0.44
TRAV5A0A0B4J249 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC12.27□□□□□ -0.44
TRAV5A0A0B4J249 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
TRAV5A0A0B4J249 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
TRAV5A0A0B4J249 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
TRAV5A0A0B4J249 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC12.27□□□□□ -0.44
TRAV5A0A0B4J249 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
TRAV5A0A0B4J249 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
TRAV5A0A0B4J249 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
TRAV5A0A0B4J249 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
TRAV5A0A0B4J249 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
TRAV5A0A0B4J249 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.44
TRAV5A0A0B4J249 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
TRAV5A0A0B4J249 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
TRAV5A0A0B4J249 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC12.27□□□□□ -0.44
TRAV5A0A0B4J249 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms