Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGA11Q9Y5H2 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGA11Q9Y5H2 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
PCDHGA11Q9Y5H2 RPS19-201ENST00000221975 500 ntTSL 3 BASIC15.32■□□□□ 0.04
PCDHGA11Q9Y5H2 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGA11Q9Y5H2 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGA11Q9Y5H2 RBM39-205ENST00000397370 612 ntTSL 2 BASIC15.32■□□□□ 0.04
PCDHGA11Q9Y5H2 SPDYE7P-202ENST00000420373 878 ntBASIC15.32■□□□□ 0.04
PCDHGA11Q9Y5H2 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGA11Q9Y5H2 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.32■□□□□ 0.04
PCDHGA11Q9Y5H2 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC15.32■□□□□ 0.04
PCDHGA11Q9Y5H2 AC084866.2-201ENST00000509956 449 ntTSL 2 BASIC15.32■□□□□ 0.04
PCDHGA11Q9Y5H2 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.32■□□□□ 0.04
PCDHGA11Q9Y5H2 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC15.32■□□□□ 0.04
PCDHGA11Q9Y5H2 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC15.32■□□□□ 0.04
PCDHGA11Q9Y5H2 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC15.32■□□□□ 0.04
PCDHGA11Q9Y5H2 LITAF-210ENST00000571976 548 ntTSL 2 BASIC15.32■□□□□ 0.04
PCDHGA11Q9Y5H2 LITAF-214ENST00000574703 486 ntTSL 2 BASIC15.32■□□□□ 0.04
PCDHGA11Q9Y5H2 MIR4313-201ENST00000580760 101 ntBASIC15.32■□□□□ 0.04
PCDHGA11Q9Y5H2 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
PCDHGA11Q9Y5H2 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGA11Q9Y5H2 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGA11Q9Y5H2 RAB34-224ENST00000636513 888 ntTSL 5 BASIC15.32■□□□□ 0.04
PCDHGA11Q9Y5H2 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
PCDHGA11Q9Y5H2 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC15.32■□□□□ 0.04
PCDHGA11Q9Y5H2 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.32■□□□□ 0.04
PCDHGA11Q9Y5H2 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
PCDHGA11Q9Y5H2 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGA11Q9Y5H2 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGA11Q9Y5H2 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.32■□□□□ 0.04
PCDHGA11Q9Y5H2 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGA11Q9Y5H2 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGA11Q9Y5H2 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGA11Q9Y5H2 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGA11Q9Y5H2 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
PCDHGA11Q9Y5H2 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
PCDHGA11Q9Y5H2 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGA11Q9Y5H2 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGA11Q9Y5H2 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGA11Q9Y5H2 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGA11Q9Y5H2 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGA11Q9Y5H2 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.32■□□□□ 0.04
PCDHGA11Q9Y5H2 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.32■□□□□ 0.04
PCDHGA11Q9Y5H2 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
PCDHGA11Q9Y5H2 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
PCDHGA11Q9Y5H2 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGA11Q9Y5H2 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
PCDHGA11Q9Y5H2 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGA11Q9Y5H2 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
PCDHGA11Q9Y5H2 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGA11Q9Y5H2 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGA11Q9Y5H2 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGA11Q9Y5H2 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC15.31■□□□□ 0.04
PCDHGA11Q9Y5H2 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
PCDHGA11Q9Y5H2 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.31■□□□□ 0.04
PCDHGA11Q9Y5H2 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGA11Q9Y5H2 AC087481.3-201ENST00000602886 1894 ntBASIC15.31■□□□□ 0.04
PCDHGA11Q9Y5H2 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.31■□□□□ 0.04
PCDHGA11Q9Y5H2 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGA11Q9Y5H2 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.31■□□□□ 0.04
PCDHGA11Q9Y5H2 AC105250.1-201ENST00000509378 2057 ntBASIC15.31■□□□□ 0.04
PCDHGA11Q9Y5H2 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGA11Q9Y5H2 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
PCDHGA11Q9Y5H2 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGA11Q9Y5H2 AL109954.1-202ENST00000564051 2148 ntBASIC15.31■□□□□ 0.04
PCDHGA11Q9Y5H2 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
PCDHGA11Q9Y5H2 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
PCDHGA11Q9Y5H2 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
PCDHGA11Q9Y5H2 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGA11Q9Y5H2 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
PCDHGA11Q9Y5H2 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
PCDHGA11Q9Y5H2 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC15.31■□□□□ 0.04
PCDHGA11Q9Y5H2 CNN2P11-201ENST00000429351 262 ntBASIC15.31■□□□□ 0.04
PCDHGA11Q9Y5H2 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
PCDHGA11Q9Y5H2 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.31■□□□□ 0.04
PCDHGA11Q9Y5H2 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC15.31■□□□□ 0.04
PCDHGA11Q9Y5H2 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGA11Q9Y5H2 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15.31■□□□□ 0.04
PCDHGA11Q9Y5H2 AP001059.3-201ENST00000619053 235 ntBASIC15.31■□□□□ 0.04
PCDHGA11Q9Y5H2 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGA11Q9Y5H2 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGA11Q9Y5H2 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGA11Q9Y5H2 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGA11Q9Y5H2 CICP4-201ENST00000447359 2812 ntBASIC15.31■□□□□ 0.04
PCDHGA11Q9Y5H2 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
PCDHGA11Q9Y5H2 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGA11Q9Y5H2 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
PCDHGA11Q9Y5H2 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.31■□□□□ 0.04
PCDHGA11Q9Y5H2 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.31■□□□□ 0.04
PCDHGA11Q9Y5H2 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGA11Q9Y5H2 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGA11Q9Y5H2 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGA11Q9Y5H2 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGA11Q9Y5H2 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGA11Q9Y5H2 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.31■□□□□ 0.04
PCDHGA11Q9Y5H2 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
PCDHGA11Q9Y5H2 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15.31■□□□□ 0.04
PCDHGA11Q9Y5H2 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.31■□□□□ 0.04
PCDHGA11Q9Y5H2 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
PCDHGA11Q9Y5H2 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms