Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGC4Q9Y5F7 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGC4Q9Y5F7 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGC4Q9Y5F7 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.87■□□□□ 0.13
PCDHGC4Q9Y5F7 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC15.87■□□□□ 0.13
PCDHGC4Q9Y5F7 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.87■□□□□ 0.13
PCDHGC4Q9Y5F7 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGC4Q9Y5F7 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGC4Q9Y5F7 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.87■□□□□ 0.13
PCDHGC4Q9Y5F7 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGC4Q9Y5F7 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGC4Q9Y5F7 AC007541.1-201ENST00000570282 1469 ntBASIC15.87■□□□□ 0.13
PCDHGC4Q9Y5F7 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGC4Q9Y5F7 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGC4Q9Y5F7 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
PCDHGC4Q9Y5F7 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGC4Q9Y5F7 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.87■□□□□ 0.13
PCDHGC4Q9Y5F7 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
PCDHGC4Q9Y5F7 OSM-203ENST00000403463 464 ntTSL 3 BASIC15.87■□□□□ 0.13
PCDHGC4Q9Y5F7 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGC4Q9Y5F7 TOMM22P5-201ENST00000416399 439 ntBASIC15.87■□□□□ 0.13
PCDHGC4Q9Y5F7 GOLGA6L11P-201ENST00000417252 1298 ntBASIC15.87■□□□□ 0.13
PCDHGC4Q9Y5F7 TERF1P3-201ENST00000505638 1227 ntBASIC15.87■□□□□ 0.13
PCDHGC4Q9Y5F7 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC15.87■□□□□ 0.13
PCDHGC4Q9Y5F7 TPRX2P-201ENST00000535362 881 ntBASIC15.87■□□□□ 0.13
PCDHGC4Q9Y5F7 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGC4Q9Y5F7 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.87■□□□□ 0.13
PCDHGC4Q9Y5F7 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGC4Q9Y5F7 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGC4Q9Y5F7 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGC4Q9Y5F7 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC15.87■□□□□ 0.13
PCDHGC4Q9Y5F7 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC15.87■□□□□ 0.13
PCDHGC4Q9Y5F7 AC105917.1-201ENST00000506637 2539 ntBASIC15.87■□□□□ 0.13
PCDHGC4Q9Y5F7 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.87■□□□□ 0.13
PCDHGC4Q9Y5F7 AC105250.1-201ENST00000509378 2057 ntBASIC15.87■□□□□ 0.13
PCDHGC4Q9Y5F7 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGC4Q9Y5F7 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGC4Q9Y5F7 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGC4Q9Y5F7 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGC4Q9Y5F7 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.86■□□□□ 0.13
PCDHGC4Q9Y5F7 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGC4Q9Y5F7 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGC4Q9Y5F7 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGC4Q9Y5F7 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGC4Q9Y5F7 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGC4Q9Y5F7 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGC4Q9Y5F7 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGC4Q9Y5F7 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGC4Q9Y5F7 CD81-207ENST00000481687 890 ntTSL 2 BASIC15.86■□□□□ 0.13
PCDHGC4Q9Y5F7 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
PCDHGC4Q9Y5F7 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC15.86■□□□□ 0.13
PCDHGC4Q9Y5F7 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC15.86■□□□□ 0.13
PCDHGC4Q9Y5F7 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC15.86■□□□□ 0.13
PCDHGC4Q9Y5F7 AC138761.1-201ENST00000584393 385 ntBASIC15.86■□□□□ 0.13
PCDHGC4Q9Y5F7 YTHDF3-AS1-201ENST00000603538 718 ntBASIC15.86■□□□□ 0.13
PCDHGC4Q9Y5F7 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGC4Q9Y5F7 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGC4Q9Y5F7 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGC4Q9Y5F7 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGC4Q9Y5F7 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGC4Q9Y5F7 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGC4Q9Y5F7 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
PCDHGC4Q9Y5F7 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGC4Q9Y5F7 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.86■□□□□ 0.13
PCDHGC4Q9Y5F7 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.86■□□□□ 0.13
PCDHGC4Q9Y5F7 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGC4Q9Y5F7 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
PCDHGC4Q9Y5F7 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
PCDHGC4Q9Y5F7 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGC4Q9Y5F7 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGC4Q9Y5F7 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.85■□□□□ 0.13
PCDHGC4Q9Y5F7 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGC4Q9Y5F7 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.85■□□□□ 0.13
PCDHGC4Q9Y5F7 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGC4Q9Y5F7 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGC4Q9Y5F7 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGC4Q9Y5F7 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGC4Q9Y5F7 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGC4Q9Y5F7 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
PCDHGC4Q9Y5F7 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGC4Q9Y5F7 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.85■□□□□ 0.13
PCDHGC4Q9Y5F7 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.85■□□□□ 0.13
PCDHGC4Q9Y5F7 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
PCDHGC4Q9Y5F7 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGC4Q9Y5F7 POLD4-211ENST00000539074 714 ntTSL 3 BASIC15.85■□□□□ 0.13
PCDHGC4Q9Y5F7 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC15.85■□□□□ 0.13
PCDHGC4Q9Y5F7 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC15.85■□□□□ 0.13
PCDHGC4Q9Y5F7 MIR3197-201ENST00000582241 73 ntBASIC15.85■□□□□ 0.13
PCDHGC4Q9Y5F7 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC15.85■□□□□ 0.13
PCDHGC4Q9Y5F7 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC15.85■□□□□ 0.13
PCDHGC4Q9Y5F7 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.85■□□□□ 0.13
PCDHGC4Q9Y5F7 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGC4Q9Y5F7 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGC4Q9Y5F7 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGC4Q9Y5F7 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGC4Q9Y5F7 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGC4Q9Y5F7 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.85■□□□□ 0.13
PCDHGC4Q9Y5F7 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.85■□□□□ 0.13
PCDHGC4Q9Y5F7 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGC4Q9Y5F7 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms