Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 MIR6069-201ENST00000620069 79 ntBASIC15.73■□□□□ 0.11
VPS9D1Q9Y2B5 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
VPS9D1Q9Y2B5 LINC00628-201ENST00000628516 1289 ntBASIC15.73■□□□□ 0.11
VPS9D1Q9Y2B5 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC15.73■□□□□ 0.11
VPS9D1Q9Y2B5 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.73■□□□□ 0.11
VPS9D1Q9Y2B5 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
VPS9D1Q9Y2B5 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
VPS9D1Q9Y2B5 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.73■□□□□ 0.11
VPS9D1Q9Y2B5 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.73■□□□□ 0.11
VPS9D1Q9Y2B5 AC092127.1-201ENST00000567093 3455 ntBASIC15.73■□□□□ 0.11
VPS9D1Q9Y2B5 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.73■□□□□ 0.11
VPS9D1Q9Y2B5 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.73■□□□□ 0.11
VPS9D1Q9Y2B5 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
VPS9D1Q9Y2B5 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
VPS9D1Q9Y2B5 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
VPS9D1Q9Y2B5 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
VPS9D1Q9Y2B5 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
VPS9D1Q9Y2B5 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.73■□□□□ 0.11
VPS9D1Q9Y2B5 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
VPS9D1Q9Y2B5 AC127383.1-201ENST00000444697 1800 ntBASIC15.73■□□□□ 0.11
VPS9D1Q9Y2B5 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.73■□□□□ 0.11
VPS9D1Q9Y2B5 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
VPS9D1Q9Y2B5 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
VPS9D1Q9Y2B5 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.72■□□□□ 0.11
VPS9D1Q9Y2B5 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
VPS9D1Q9Y2B5 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
VPS9D1Q9Y2B5 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
VPS9D1Q9Y2B5 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
VPS9D1Q9Y2B5 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
VPS9D1Q9Y2B5 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
VPS9D1Q9Y2B5 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
VPS9D1Q9Y2B5 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
VPS9D1Q9Y2B5 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
VPS9D1Q9Y2B5 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC15.72■□□□□ 0.11
VPS9D1Q9Y2B5 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
VPS9D1Q9Y2B5 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
VPS9D1Q9Y2B5 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
VPS9D1Q9Y2B5 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
VPS9D1Q9Y2B5 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
VPS9D1Q9Y2B5 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
VPS9D1Q9Y2B5 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
VPS9D1Q9Y2B5 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.72■□□□□ 0.11
VPS9D1Q9Y2B5 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
VPS9D1Q9Y2B5 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC15.72■□□□□ 0.11
VPS9D1Q9Y2B5 AL355994.1-201ENST00000424379 260 ntBASIC15.72■□□□□ 0.11
VPS9D1Q9Y2B5 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.72■□□□□ 0.11
VPS9D1Q9Y2B5 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
VPS9D1Q9Y2B5 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
VPS9D1Q9Y2B5 MTND2P25-201ENST00000449028 610 ntBASIC15.72■□□□□ 0.11
VPS9D1Q9Y2B5 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC15.72■□□□□ 0.11
VPS9D1Q9Y2B5 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
VPS9D1Q9Y2B5 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC15.72■□□□□ 0.11
VPS9D1Q9Y2B5 AC114550.1-202ENST00000522661 643 ntTSL 2 BASIC15.72■□□□□ 0.11
VPS9D1Q9Y2B5 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC15.72■□□□□ 0.11
VPS9D1Q9Y2B5 SLC14A1-206ENST00000535474 1048 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
VPS9D1Q9Y2B5 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
VPS9D1Q9Y2B5 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC15.72■□□□□ 0.11
VPS9D1Q9Y2B5 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.72■□□□□ 0.11
VPS9D1Q9Y2B5 AL589739.1-201ENST00000607720 493 ntBASIC15.72■□□□□ 0.11
VPS9D1Q9Y2B5 AC068631.1-255ENST00000608173 588 ntTSL 5 BASIC15.72■□□□□ 0.11
VPS9D1Q9Y2B5 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
VPS9D1Q9Y2B5 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC15.72■□□□□ 0.11
VPS9D1Q9Y2B5 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
VPS9D1Q9Y2B5 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
VPS9D1Q9Y2B5 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
VPS9D1Q9Y2B5 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
VPS9D1Q9Y2B5 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.72■□□□□ 0.11
VPS9D1Q9Y2B5 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
VPS9D1Q9Y2B5 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
VPS9D1Q9Y2B5 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VPS9D1Q9Y2B5 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
VPS9D1Q9Y2B5 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
VPS9D1Q9Y2B5 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
VPS9D1Q9Y2B5 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
VPS9D1Q9Y2B5 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
VPS9D1Q9Y2B5 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
VPS9D1Q9Y2B5 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.71■□□□□ 0.11
VPS9D1Q9Y2B5 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VPS9D1Q9Y2B5 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VPS9D1Q9Y2B5 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VPS9D1Q9Y2B5 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
VPS9D1Q9Y2B5 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.71■□□□□ 0.11
VPS9D1Q9Y2B5 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VPS9D1Q9Y2B5 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VPS9D1Q9Y2B5 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
VPS9D1Q9Y2B5 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
VPS9D1Q9Y2B5 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VPS9D1Q9Y2B5 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VPS9D1Q9Y2B5 CCDC152-202ENST00000388827 1237 ntTSL 2 BASIC15.71■□□□□ 0.11
VPS9D1Q9Y2B5 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
VPS9D1Q9Y2B5 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.71■□□□□ 0.11
VPS9D1Q9Y2B5 DNAJB3-202ENST00000449667 1266 ntBASIC15.71■□□□□ 0.11
VPS9D1Q9Y2B5 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.71■□□□□ 0.11
VPS9D1Q9Y2B5 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
VPS9D1Q9Y2B5 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.71■□□□□ 0.11
VPS9D1Q9Y2B5 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC15.71■□□□□ 0.11
VPS9D1Q9Y2B5 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
VPS9D1Q9Y2B5 AC025678.2-201ENST00000562061 970 ntBASIC15.71■□□□□ 0.11
VPS9D1Q9Y2B5 AL596442.2-201ENST00000610240 980 ntBASIC15.71■□□□□ 0.11
VPS9D1Q9Y2B5 GPALPP1-207ENST00000611650 899 ntBASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms