Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SATB2Q9UPW6 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
SATB2Q9UPW6 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
SATB2Q9UPW6 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.5■□□□□ 0.07
SATB2Q9UPW6 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SATB2Q9UPW6 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
SATB2Q9UPW6 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
SATB2Q9UPW6 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SATB2Q9UPW6 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.5■□□□□ 0.07
SATB2Q9UPW6 CYP2T1P-202ENST00000641596 2535 ntBASIC15.5■□□□□ 0.07
SATB2Q9UPW6 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC15.5■□□□□ 0.07
SATB2Q9UPW6 AC006449.5-201ENST00000610658 2098 ntBASIC15.5■□□□□ 0.07
SATB2Q9UPW6 AL031731.1-201ENST00000642131 2094 ntBASIC15.5■□□□□ 0.07
SATB2Q9UPW6 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.5■□□□□ 0.07
SATB2Q9UPW6 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SATB2Q9UPW6 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.5■□□□□ 0.07
SATB2Q9UPW6 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SATB2Q9UPW6 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
SATB2Q9UPW6 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SATB2Q9UPW6 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SATB2Q9UPW6 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.49■□□□□ 0.07
SATB2Q9UPW6 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SATB2Q9UPW6 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.49■□□□□ 0.07
SATB2Q9UPW6 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
SATB2Q9UPW6 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SATB2Q9UPW6 AL589702.1-201ENST00000641229 1509 ntBASIC15.49■□□□□ 0.07
SATB2Q9UPW6 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.49■□□□□ 0.07
SATB2Q9UPW6 GGT4P-201ENST00000623672 1708 ntBASIC15.49■□□□□ 0.07
SATB2Q9UPW6 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.49■□□□□ 0.07
SATB2Q9UPW6 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SATB2Q9UPW6 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SATB2Q9UPW6 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
SATB2Q9UPW6 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SATB2Q9UPW6 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
SATB2Q9UPW6 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
SATB2Q9UPW6 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
SATB2Q9UPW6 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.49■□□□□ 0.07
SATB2Q9UPW6 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SATB2Q9UPW6 AL589987.1-201ENST00000453380 819 ntBASIC15.49■□□□□ 0.07
SATB2Q9UPW6 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC15.49■□□□□ 0.07
SATB2Q9UPW6 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC15.49■□□□□ 0.07
SATB2Q9UPW6 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC15.49■□□□□ 0.07
SATB2Q9UPW6 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.49■□□□□ 0.07
SATB2Q9UPW6 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC15.49■□□□□ 0.07
SATB2Q9UPW6 MIR6069-201ENST00000620069 79 ntBASIC15.49■□□□□ 0.07
SATB2Q9UPW6 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SATB2Q9UPW6 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.49■□□□□ 0.07
SATB2Q9UPW6 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC15.49■□□□□ 0.07
SATB2Q9UPW6 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SATB2Q9UPW6 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.49■□□□□ 0.07
SATB2Q9UPW6 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
SATB2Q9UPW6 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SATB2Q9UPW6 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SATB2Q9UPW6 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.49■□□□□ 0.07
SATB2Q9UPW6 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
SATB2Q9UPW6 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SATB2Q9UPW6 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
SATB2Q9UPW6 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SATB2Q9UPW6 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SATB2Q9UPW6 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.49■□□□□ 0.07
SATB2Q9UPW6 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SATB2Q9UPW6 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
SATB2Q9UPW6 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
SATB2Q9UPW6 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SATB2Q9UPW6 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.48■□□□□ 0.07
SATB2Q9UPW6 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.48■□□□□ 0.07
SATB2Q9UPW6 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SATB2Q9UPW6 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
SATB2Q9UPW6 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC15.48■□□□□ 0.07
SATB2Q9UPW6 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.48■□□□□ 0.07
SATB2Q9UPW6 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
SATB2Q9UPW6 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SATB2Q9UPW6 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SATB2Q9UPW6 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
SATB2Q9UPW6 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.48■□□□□ 0.07
SATB2Q9UPW6 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
SATB2Q9UPW6 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.48■□□□□ 0.07
SATB2Q9UPW6 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SATB2Q9UPW6 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SATB2Q9UPW6 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SATB2Q9UPW6 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.48■□□□□ 0.07
SATB2Q9UPW6 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SATB2Q9UPW6 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SATB2Q9UPW6 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SATB2Q9UPW6 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
SATB2Q9UPW6 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
SATB2Q9UPW6 SPDYE17-201ENST00000412399 783 ntBASIC15.48■□□□□ 0.07
SATB2Q9UPW6 TMEM14DP-201ENST00000422205 345 ntBASIC15.48■□□□□ 0.07
SATB2Q9UPW6 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC15.48■□□□□ 0.07
SATB2Q9UPW6 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.48■□□□□ 0.07
SATB2Q9UPW6 AC234783.1-201ENST00000441761 496 ntBASIC15.48■□□□□ 0.07
SATB2Q9UPW6 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC15.48■□□□□ 0.07
SATB2Q9UPW6 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC15.48■□□□□ 0.07
SATB2Q9UPW6 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC15.48■□□□□ 0.07
SATB2Q9UPW6 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SATB2Q9UPW6 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC15.48■□□□□ 0.07
SATB2Q9UPW6 FTH1-202ENST00000526640 786 ntTSL 2 BASIC15.48■□□□□ 0.07
SATB2Q9UPW6 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC15.48■□□□□ 0.07
SATB2Q9UPW6 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC15.48■□□□□ 0.07
SATB2Q9UPW6 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms