Protein–RNA interactions for Protein: Q9UN81

L1RE1, LINE-1 retrotransposable element ORF1 protein, humanhuman

Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
L1RE1Q9UN81 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
L1RE1Q9UN81 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
L1RE1Q9UN81 CYP4F24P-201ENST00000586049 1580 ntBASIC17.24■□□□□ 0.35
L1RE1Q9UN81 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
L1RE1Q9UN81 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
L1RE1Q9UN81 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
L1RE1Q9UN81 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
L1RE1Q9UN81 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
L1RE1Q9UN81 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
L1RE1Q9UN81 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
L1RE1Q9UN81 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
L1RE1Q9UN81 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
L1RE1Q9UN81 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
L1RE1Q9UN81 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
L1RE1Q9UN81 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
L1RE1Q9UN81 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC17.24■□□□□ 0.35
L1RE1Q9UN81 MRPS18AP1-201ENST00000414458 589 ntBASIC17.24■□□□□ 0.35
L1RE1Q9UN81 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
L1RE1Q9UN81 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC17.24■□□□□ 0.35
L1RE1Q9UN81 AL512638.1-201ENST00000457493 794 ntBASIC17.24■□□□□ 0.35
L1RE1Q9UN81 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC17.24■□□□□ 0.35
L1RE1Q9UN81 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC17.24■□□□□ 0.35
L1RE1Q9UN81 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
L1RE1Q9UN81 AL844908.2-201ENST00000609461 460 ntBASIC17.24■□□□□ 0.35
L1RE1Q9UN81 IMPDH1P4-201ENST00000445028 1534 ntBASIC17.24■□□□□ 0.35
L1RE1Q9UN81 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
L1RE1Q9UN81 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC17.24■□□□□ 0.35
L1RE1Q9UN81 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.24■□□□□ 0.35
L1RE1Q9UN81 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.24■□□□□ 0.35
L1RE1Q9UN81 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC17.24■□□□□ 0.35
L1RE1Q9UN81 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC17.24■□□□□ 0.35
L1RE1Q9UN81 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
L1RE1Q9UN81 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
L1RE1Q9UN81 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
L1RE1Q9UN81 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC17.24■□□□□ 0.35
L1RE1Q9UN81 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
L1RE1Q9UN81 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
L1RE1Q9UN81 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
L1RE1Q9UN81 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC17.23■□□□□ 0.35
L1RE1Q9UN81 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC17.23■□□□□ 0.35
L1RE1Q9UN81 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC17.23■□□□□ 0.35
L1RE1Q9UN81 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
L1RE1Q9UN81 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
L1RE1Q9UN81 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
L1RE1Q9UN81 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
L1RE1Q9UN81 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC17.23■□□□□ 0.35
L1RE1Q9UN81 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
L1RE1Q9UN81 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
L1RE1Q9UN81 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC17.23■□□□□ 0.35
L1RE1Q9UN81 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
L1RE1Q9UN81 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
L1RE1Q9UN81 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
L1RE1Q9UN81 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
L1RE1Q9UN81 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC17.23■□□□□ 0.35
L1RE1Q9UN81 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
L1RE1Q9UN81 PRR29-209ENST00000582540 967 ntTSL 2 BASIC17.23■□□□□ 0.35
L1RE1Q9UN81 AC092364.2-202ENST00000597012 1073 ntBASIC17.23■□□□□ 0.35
L1RE1Q9UN81 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC17.23■□□□□ 0.35
L1RE1Q9UN81 MECR-202ENST00000373791 2416 ntTSL 2 BASIC17.23■□□□□ 0.35
L1RE1Q9UN81 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
L1RE1Q9UN81 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
L1RE1Q9UN81 KRT8P12-202ENST00000472924 1397 ntBASIC17.23■□□□□ 0.35
L1RE1Q9UN81 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
L1RE1Q9UN81 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC17.23■□□□□ 0.35
L1RE1Q9UN81 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC17.23■□□□□ 0.35
L1RE1Q9UN81 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC17.23■□□□□ 0.35
L1RE1Q9UN81 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
L1RE1Q9UN81 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC17.23■□□□□ 0.35
L1RE1Q9UN81 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
L1RE1Q9UN81 AC087499.5-201ENST00000452760 1342 ntBASIC17.22■□□□□ 0.35
L1RE1Q9UN81 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
L1RE1Q9UN81 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
L1RE1Q9UN81 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC17.22■□□□□ 0.35
L1RE1Q9UN81 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
L1RE1Q9UN81 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC17.22■□□□□ 0.35
L1RE1Q9UN81 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
L1RE1Q9UN81 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
L1RE1Q9UN81 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC17.22■□□□□ 0.35
L1RE1Q9UN81 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
L1RE1Q9UN81 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
L1RE1Q9UN81 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC17.22■□□□□ 0.35
L1RE1Q9UN81 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
L1RE1Q9UN81 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC17.22■□□□□ 0.35
L1RE1Q9UN81 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
L1RE1Q9UN81 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC17.22■□□□□ 0.35
L1RE1Q9UN81 MIR661-201ENST00000384842 89 ntBASIC17.22■□□□□ 0.35
L1RE1Q9UN81 CENPM-206ENST00000407253 818 ntTSL 2 BASIC17.22■□□□□ 0.35
L1RE1Q9UN81 HNRNPA1P40-201ENST00000426371 1278 ntBASIC17.22■□□□□ 0.35
L1RE1Q9UN81 AC009477.1-201ENST00000452936 217 ntBASIC17.22■□□□□ 0.35
L1RE1Q9UN81 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC17.22■□□□□ 0.35
L1RE1Q9UN81 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC17.22■□□□□ 0.35
L1RE1Q9UN81 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC17.22■□□□□ 0.35
L1RE1Q9UN81 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC17.22■□□□□ 0.35
L1RE1Q9UN81 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC17.22■□□□□ 0.35
L1RE1Q9UN81 RAB34-223ENST00000636154 730 ntTSL 2 BASIC17.22■□□□□ 0.35
L1RE1Q9UN81 POLL-206ENST00000370172 2308 ntTSL 2 BASIC17.22■□□□□ 0.35
L1RE1Q9UN81 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
L1RE1Q9UN81 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC17.22■□□□□ 0.35
L1RE1Q9UN81 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
L1RE1Q9UN81 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms