Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CNTN3Q9P232 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CNTN3Q9P232 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CNTN3Q9P232 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CNTN3Q9P232 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
CNTN3Q9P232 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.84■□□□□ 0.29
CNTN3Q9P232 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CNTN3Q9P232 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.84■□□□□ 0.29
CNTN3Q9P232 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.84■□□□□ 0.29
CNTN3Q9P232 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CNTN3Q9P232 SUN1-204ENST00000403868 978 ntTSL 2 BASIC16.84■□□□□ 0.29
CNTN3Q9P232 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.84■□□□□ 0.29
CNTN3Q9P232 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC16.84■□□□□ 0.29
CNTN3Q9P232 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC16.84■□□□□ 0.29
CNTN3Q9P232 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC16.84■□□□□ 0.29
CNTN3Q9P232 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC16.84■□□□□ 0.29
CNTN3Q9P232 AC008735.3-201ENST00000596646 500 ntBASIC16.84■□□□□ 0.29
CNTN3Q9P232 AL162274.1-201ENST00000617191 1098 ntBASIC16.84■□□□□ 0.29
CNTN3Q9P232 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC16.84■□□□□ 0.29
CNTN3Q9P232 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC16.84■□□□□ 0.29
CNTN3Q9P232 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CNTN3Q9P232 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CNTN3Q9P232 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CNTN3Q9P232 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CNTN3Q9P232 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CNTN3Q9P232 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.84■□□□□ 0.29
CNTN3Q9P232 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CNTN3Q9P232 AC127383.1-201ENST00000444697 1800 ntBASIC16.84■□□□□ 0.29
CNTN3Q9P232 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CNTN3Q9P232 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
CNTN3Q9P232 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CNTN3Q9P232 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
CNTN3Q9P232 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.83■□□□□ 0.29
CNTN3Q9P232 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
CNTN3Q9P232 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
CNTN3Q9P232 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CNTN3Q9P232 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
CNTN3Q9P232 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
CNTN3Q9P232 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CNTN3Q9P232 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CNTN3Q9P232 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CNTN3Q9P232 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CNTN3Q9P232 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.83■□□□□ 0.28
CNTN3Q9P232 OR8S1-201ENST00000310194 1080 ntBASIC16.83■□□□□ 0.28
CNTN3Q9P232 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CNTN3Q9P232 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
CNTN3Q9P232 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CNTN3Q9P232 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CNTN3Q9P232 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
CNTN3Q9P232 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CNTN3Q9P232 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CNTN3Q9P232 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CNTN3Q9P232 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CNTN3Q9P232 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CNTN3Q9P232 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.83■□□□□ 0.28
CNTN3Q9P232 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC16.83■□□□□ 0.28
CNTN3Q9P232 MXI1-205ENST00000393134 889 ntTSL 2 BASIC16.83■□□□□ 0.28
CNTN3Q9P232 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CNTN3Q9P232 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CNTN3Q9P232 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CNTN3Q9P232 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CNTN3Q9P232 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CNTN3Q9P232 PGF-202ENST00000405431 666 ntTSL 5 BASIC16.83■□□□□ 0.28
CNTN3Q9P232 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.83■□□□□ 0.28
CNTN3Q9P232 ACTG1P3-201ENST00000431775 1114 ntBASIC16.83■□□□□ 0.28
CNTN3Q9P232 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.83■□□□□ 0.28
CNTN3Q9P232 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC16.83■□□□□ 0.28
CNTN3Q9P232 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC16.83■□□□□ 0.28
CNTN3Q9P232 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC16.83■□□□□ 0.28
CNTN3Q9P232 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CNTN3Q9P232 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CNTN3Q9P232 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CNTN3Q9P232 MIR5189-201ENST00000577370 114 ntBASIC16.83■□□□□ 0.28
CNTN3Q9P232 AC107373.2-201ENST00000607735 490 ntBASIC16.83■□□□□ 0.28
CNTN3Q9P232 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.83■□□□□ 0.28
CNTN3Q9P232 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CNTN3Q9P232 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CNTN3Q9P232 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CNTN3Q9P232 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CNTN3Q9P232 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CNTN3Q9P232 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CNTN3Q9P232 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
CNTN3Q9P232 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CNTN3Q9P232 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CNTN3Q9P232 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CNTN3Q9P232 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.82■□□□□ 0.28
CNTN3Q9P232 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC16.82■□□□□ 0.28
CNTN3Q9P232 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CNTN3Q9P232 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CNTN3Q9P232 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
CNTN3Q9P232 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CNTN3Q9P232 APOA1-205ENST00000375329 927 ntTSL 2 BASIC16.82■□□□□ 0.28
CNTN3Q9P232 TEX30-203ENST00000376022 828 ntTSL 2 BASIC16.82■□□□□ 0.28
CNTN3Q9P232 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC16.82■□□□□ 0.28
CNTN3Q9P232 AC079776.1-201ENST00000401540 1152 ntBASIC16.82■□□□□ 0.28
CNTN3Q9P232 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CNTN3Q9P232 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.82■□□□□ 0.28
CNTN3Q9P232 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC16.82■□□□□ 0.28
CNTN3Q9P232 USP32P1-208ENST00000506594 1164 ntBASIC16.82■□□□□ 0.28
CNTN3Q9P232 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms