Protein–RNA interactions for Protein: Q9NYX4

CALY, Neuron-specific vesicular protein calcyon, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALYQ9NYX4 SLBP-205ENST00000488267 987 ntTSL 2 BASIC13.05□□□□□ -0.32
CALYQ9NYX4 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC13.05□□□□□ -0.32
CALYQ9NYX4 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC13.05□□□□□ -0.32
CALYQ9NYX4 AP001160.2-201ENST00000596071 487 ntBASIC13.05□□□□□ -0.32
CALYQ9NYX4 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
CALYQ9NYX4 GPER1-207ENST00000619052 571 ntTSL 2 BASIC13.05□□□□□ -0.32
CALYQ9NYX4 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC13.05□□□□□ -0.32
CALYQ9NYX4 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CALYQ9NYX4 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CALYQ9NYX4 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CALYQ9NYX4 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CALYQ9NYX4 TUBB3P1-201ENST00000405796 1332 ntBASIC13.05□□□□□ -0.32
CALYQ9NYX4 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CALYQ9NYX4 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CALYQ9NYX4 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CALYQ9NYX4 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CALYQ9NYX4 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CALYQ9NYX4 AC009090.5-201ENST00000624886 2285 ntBASIC13.05□□□□□ -0.32
CALYQ9NYX4 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC13.05□□□□□ -0.32
CALYQ9NYX4 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
CALYQ9NYX4 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CALYQ9NYX4 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CALYQ9NYX4 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CALYQ9NYX4 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
CALYQ9NYX4 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CALYQ9NYX4 BANP-201ENST00000286122 2368 ntTSL 5 BASIC13.05□□□□□ -0.32
CALYQ9NYX4 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CALYQ9NYX4 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC13.04□□□□□ -0.32
CALYQ9NYX4 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC13.04□□□□□ -0.32
CALYQ9NYX4 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CALYQ9NYX4 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CALYQ9NYX4 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CALYQ9NYX4 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC13.04□□□□□ -0.32
CALYQ9NYX4 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
CALYQ9NYX4 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CALYQ9NYX4 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CALYQ9NYX4 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
CALYQ9NYX4 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC13.04□□□□□ -0.32
CALYQ9NYX4 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CALYQ9NYX4 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CALYQ9NYX4 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC13.04□□□□□ -0.32
CALYQ9NYX4 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC13.04□□□□□ -0.32
CALYQ9NYX4 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
CALYQ9NYX4 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
CALYQ9NYX4 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
CALYQ9NYX4 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CALYQ9NYX4 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CALYQ9NYX4 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CALYQ9NYX4 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CALYQ9NYX4 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CALYQ9NYX4 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
CALYQ9NYX4 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC13.04□□□□□ -0.32
CALYQ9NYX4 AL645939.2-201ENST00000427340 991 ntBASIC13.04□□□□□ -0.32
CALYQ9NYX4 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC13.04□□□□□ -0.32
CALYQ9NYX4 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CALYQ9NYX4 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CALYQ9NYX4 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC13.04□□□□□ -0.32
CALYQ9NYX4 HLA-V-204ENST00000476601 1289 ntBASIC13.04□□□□□ -0.32
CALYQ9NYX4 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC13.04□□□□□ -0.32
CALYQ9NYX4 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC13.04□□□□□ -0.32
CALYQ9NYX4 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
CALYQ9NYX4 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC13.04□□□□□ -0.32
CALYQ9NYX4 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC13.04□□□□□ -0.32
CALYQ9NYX4 LSM12-202ENST00000585388 942 ntTSL 3 BASIC13.04□□□□□ -0.32
CALYQ9NYX4 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC13.04□□□□□ -0.32
CALYQ9NYX4 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC13.04□□□□□ -0.32
CALYQ9NYX4 COQ4-205ENST00000609948 956 ntTSL 2 BASIC13.04□□□□□ -0.32
CALYQ9NYX4 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
CALYQ9NYX4 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CALYQ9NYX4 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
CALYQ9NYX4 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CALYQ9NYX4 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CALYQ9NYX4 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CALYQ9NYX4 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.04□□□□□ -0.32
CALYQ9NYX4 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CALYQ9NYX4 FO538757.1-201ENST00000623083 1397 ntBASIC13.04□□□□□ -0.32
CALYQ9NYX4 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CALYQ9NYX4 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CALYQ9NYX4 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC13.04□□□□□ -0.32
CALYQ9NYX4 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CALYQ9NYX4 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CALYQ9NYX4 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CALYQ9NYX4 AL161772.1-201ENST00000610494 4412 ntBASIC13.04□□□□□ -0.32
CALYQ9NYX4 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.03□□□□□ -0.32
CALYQ9NYX4 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CALYQ9NYX4 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC13.03□□□□□ -0.32
CALYQ9NYX4 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC13.03□□□□□ -0.32
CALYQ9NYX4 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CALYQ9NYX4 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC13.03□□□□□ -0.32
CALYQ9NYX4 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC13.03□□□□□ -0.32
CALYQ9NYX4 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CALYQ9NYX4 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CALYQ9NYX4 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CALYQ9NYX4 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CALYQ9NYX4 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CALYQ9NYX4 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CALYQ9NYX4 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CALYQ9NYX4 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CALYQ9NYX4 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC13.03□□□□□ -0.32
CALYQ9NYX4 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms