Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.01■□□□□ 0.15
LRRC40Q9H9A6 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRRC40Q9H9A6 DNAJB3-202ENST00000449667 1266 ntBASIC16.01■□□□□ 0.15
LRRC40Q9H9A6 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.01■□□□□ 0.15
LRRC40Q9H9A6 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LRRC40Q9H9A6 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.01■□□□□ 0.15
LRRC40Q9H9A6 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LRRC40Q9H9A6 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.01■□□□□ 0.15
LRRC40Q9H9A6 AC069262.1-201ENST00000539058 672 ntBASIC16.01■□□□□ 0.15
LRRC40Q9H9A6 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.01■□□□□ 0.15
LRRC40Q9H9A6 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.01■□□□□ 0.15
LRRC40Q9H9A6 AL589739.1-201ENST00000607720 493 ntBASIC16.01■□□□□ 0.15
LRRC40Q9H9A6 AC079781.4-201ENST00000641908 219 ntBASIC16.01■□□□□ 0.15
LRRC40Q9H9A6 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.01■□□□□ 0.15
LRRC40Q9H9A6 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LRRC40Q9H9A6 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRRC40Q9H9A6 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
LRRC40Q9H9A6 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRRC40Q9H9A6 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC16.01■□□□□ 0.15
LRRC40Q9H9A6 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
LRRC40Q9H9A6 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LRRC40Q9H9A6 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRRC40Q9H9A6 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LRRC40Q9H9A6 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.01■□□□□ 0.15
LRRC40Q9H9A6 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRRC40Q9H9A6 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
LRRC40Q9H9A6 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRRC40Q9H9A6 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRRC40Q9H9A6 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC16.01■□□□□ 0.15
LRRC40Q9H9A6 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRRC40Q9H9A6 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRRC40Q9H9A6 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRRC40Q9H9A6 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LRRC40Q9H9A6 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.01■□□□□ 0.15
LRRC40Q9H9A6 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
LRRC40Q9H9A6 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.01■□□□□ 0.15
LRRC40Q9H9A6 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRRC40Q9H9A6 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LRRC40Q9H9A6 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LRRC40Q9H9A6 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16■□□□□ 0.15
LRRC40Q9H9A6 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16■□□□□ 0.15
LRRC40Q9H9A6 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LRRC40Q9H9A6 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16■□□□□ 0.15
LRRC40Q9H9A6 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LRRC40Q9H9A6 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LRRC40Q9H9A6 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16■□□□□ 0.15
LRRC40Q9H9A6 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LRRC40Q9H9A6 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16■□□□□ 0.15
LRRC40Q9H9A6 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LRRC40Q9H9A6 C18orf15-201ENST00000623680 2534 ntBASIC16■□□□□ 0.15
LRRC40Q9H9A6 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
LRRC40Q9H9A6 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC16■□□□□ 0.15
LRRC40Q9H9A6 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LRRC40Q9H9A6 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LRRC40Q9H9A6 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
LRRC40Q9H9A6 MIR1233-2-201ENST00000408138 82 ntBASIC16■□□□□ 0.15
LRRC40Q9H9A6 MIR1233-1-201ENST00000408722 82 ntBASIC16■□□□□ 0.15
LRRC40Q9H9A6 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16■□□□□ 0.15
LRRC40Q9H9A6 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16■□□□□ 0.15
LRRC40Q9H9A6 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16■□□□□ 0.15
LRRC40Q9H9A6 HLA-J-203ENST00000494367 1087 ntBASIC16■□□□□ 0.15
LRRC40Q9H9A6 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16■□□□□ 0.15
LRRC40Q9H9A6 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
LRRC40Q9H9A6 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16■□□□□ 0.15
LRRC40Q9H9A6 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
LRRC40Q9H9A6 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16■□□□□ 0.15
LRRC40Q9H9A6 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
LRRC40Q9H9A6 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
LRRC40Q9H9A6 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
LRRC40Q9H9A6 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16■□□□□ 0.15
LRRC40Q9H9A6 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16■□□□□ 0.15
LRRC40Q9H9A6 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
LRRC40Q9H9A6 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LRRC40Q9H9A6 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LRRC40Q9H9A6 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LRRC40Q9H9A6 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LRRC40Q9H9A6 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16■□□□□ 0.15
LRRC40Q9H9A6 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16■□□□□ 0.15
LRRC40Q9H9A6 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
LRRC40Q9H9A6 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
LRRC40Q9H9A6 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
LRRC40Q9H9A6 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC16■□□□□ 0.15
LRRC40Q9H9A6 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LRRC40Q9H9A6 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
LRRC40Q9H9A6 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
LRRC40Q9H9A6 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
LRRC40Q9H9A6 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LRRC40Q9H9A6 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.99■□□□□ 0.15
LRRC40Q9H9A6 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
LRRC40Q9H9A6 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LRRC40Q9H9A6 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
LRRC40Q9H9A6 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC15.99■□□□□ 0.15
LRRC40Q9H9A6 AL080243.2-201ENST00000418783 582 ntBASIC15.99■□□□□ 0.15
LRRC40Q9H9A6 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
LRRC40Q9H9A6 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LRRC40Q9H9A6 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.99■□□□□ 0.15
LRRC40Q9H9A6 SERBP1P3-201ENST00000459980 809 ntBASIC15.99■□□□□ 0.15
LRRC40Q9H9A6 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.99■□□□□ 0.15
LRRC40Q9H9A6 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LRRC40Q9H9A6 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms