Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 AC005840.4-201ENST00000541242 2494 ntBASIC23.74■■□□□ 1.39
SCAF1Q9H7N4 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
SCAF1Q9H7N4 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC23.74■■□□□ 1.39
SCAF1Q9H7N4 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
SCAF1Q9H7N4 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
SCAF1Q9H7N4 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC23.74■■□□□ 1.39
SCAF1Q9H7N4 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC23.74■■□□□ 1.39
SCAF1Q9H7N4 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC23.74■■□□□ 1.39
SCAF1Q9H7N4 DFFBP1-201ENST00000433250 979 ntBASIC23.74■■□□□ 1.39
SCAF1Q9H7N4 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC23.74■■□□□ 1.39
SCAF1Q9H7N4 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC23.74■■□□□ 1.39
SCAF1Q9H7N4 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC23.74■■□□□ 1.39
SCAF1Q9H7N4 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC23.74■■□□□ 1.39
SCAF1Q9H7N4 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
SCAF1Q9H7N4 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC23.74■■□□□ 1.39
SCAF1Q9H7N4 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC23.74■■□□□ 1.39
SCAF1Q9H7N4 ARL16-210ENST00000574938 751 ntTSL 2 BASIC23.74■■□□□ 1.39
SCAF1Q9H7N4 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
SCAF1Q9H7N4 MIR6869-201ENST00000619434 62 ntBASIC23.74■■□□□ 1.39
SCAF1Q9H7N4 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SCAF1Q9H7N4 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SCAF1Q9H7N4 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
SCAF1Q9H7N4 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
SCAF1Q9H7N4 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
SCAF1Q9H7N4 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
SCAF1Q9H7N4 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
SCAF1Q9H7N4 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
SCAF1Q9H7N4 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SCAF1Q9H7N4 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SCAF1Q9H7N4 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
SCAF1Q9H7N4 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC23.73■■□□□ 1.39
SCAF1Q9H7N4 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC23.73■■□□□ 1.39
SCAF1Q9H7N4 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
SCAF1Q9H7N4 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
SCAF1Q9H7N4 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC23.73■■□□□ 1.39
SCAF1Q9H7N4 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
SCAF1Q9H7N4 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
SCAF1Q9H7N4 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC23.73■■□□□ 1.39
SCAF1Q9H7N4 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
SCAF1Q9H7N4 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SCAF1Q9H7N4 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
SCAF1Q9H7N4 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC23.73■■□□□ 1.39
SCAF1Q9H7N4 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC23.73■■□□□ 1.39
SCAF1Q9H7N4 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
SCAF1Q9H7N4 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC23.73■■□□□ 1.39
SCAF1Q9H7N4 TMEM14DP-201ENST00000422205 345 ntBASIC23.73■■□□□ 1.39
SCAF1Q9H7N4 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
SCAF1Q9H7N4 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC23.73■■□□□ 1.39
SCAF1Q9H7N4 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC23.73■■□□□ 1.39
SCAF1Q9H7N4 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
SCAF1Q9H7N4 AC099548.2-209ENST00000480264 625 ntBASIC23.73■■□□□ 1.39
SCAF1Q9H7N4 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
SCAF1Q9H7N4 AC016550.3-201ENST00000515706 767 ntBASIC23.73■■□□□ 1.39
SCAF1Q9H7N4 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC23.73■■□□□ 1.39
SCAF1Q9H7N4 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
SCAF1Q9H7N4 CHCHD2P3-201ENST00000603038 451 ntBASIC23.73■■□□□ 1.39
SCAF1Q9H7N4 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC23.73■■□□□ 1.39
SCAF1Q9H7N4 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
SCAF1Q9H7N4 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SCAF1Q9H7N4 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC23.73■■□□□ 1.39
SCAF1Q9H7N4 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
SCAF1Q9H7N4 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SCAF1Q9H7N4 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
SCAF1Q9H7N4 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC23.73■■□□□ 1.39
SCAF1Q9H7N4 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC23.73■■□□□ 1.39
SCAF1Q9H7N4 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
SCAF1Q9H7N4 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC23.72■■□□□ 1.39
SCAF1Q9H7N4 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SCAF1Q9H7N4 NID2-208ENST00000617139 3827 ntTSL 5 BASIC23.72■■□□□ 1.39
SCAF1Q9H7N4 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
SCAF1Q9H7N4 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SCAF1Q9H7N4 AC007686.3-201ENST00000619017 3487 ntBASIC23.72■■□□□ 1.39
SCAF1Q9H7N4 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SCAF1Q9H7N4 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
SCAF1Q9H7N4 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
SCAF1Q9H7N4 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
SCAF1Q9H7N4 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC23.72■■□□□ 1.39
SCAF1Q9H7N4 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SCAF1Q9H7N4 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SCAF1Q9H7N4 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
SCAF1Q9H7N4 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC23.72■■□□□ 1.39
SCAF1Q9H7N4 MGST1-204ENST00000396209 979 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
SCAF1Q9H7N4 HIST1H2BPS3-201ENST00000419683 341 ntBASIC23.72■■□□□ 1.39
SCAF1Q9H7N4 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC23.72■■□□□ 1.39
SCAF1Q9H7N4 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC23.72■■□□□ 1.39
SCAF1Q9H7N4 MTCO2P3-201ENST00000442543 421 ntBASIC23.72■■□□□ 1.39
SCAF1Q9H7N4 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
SCAF1Q9H7N4 EAF2-202ENST00000451944 960 ntTSL 2 BASIC23.72■■□□□ 1.39
SCAF1Q9H7N4 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
SCAF1Q9H7N4 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SCAF1Q9H7N4 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
SCAF1Q9H7N4 CAB39P1-201ENST00000502277 460 ntBASIC23.72■■□□□ 1.39
SCAF1Q9H7N4 AP001020.1-201ENST00000579595 464 ntTSL 3 BASIC23.72■■□□□ 1.39
SCAF1Q9H7N4 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC23.72■■□□□ 1.39
SCAF1Q9H7N4 AL109924.4-201ENST00000623089 670 ntBASIC23.72■■□□□ 1.39
SCAF1Q9H7N4 AC007431.3-201ENST00000623221 587 ntBASIC23.72■■□□□ 1.39
SCAF1Q9H7N4 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC23.72■■□□□ 1.39
SCAF1Q9H7N4 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SCAF1Q9H7N4 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
SCAF1Q9H7N4 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms