Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
KRTAP4-1Q9BYQ7 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
KRTAP4-1Q9BYQ7 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC8.01□□□□□ -1.13
KRTAP4-1Q9BYQ7 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC8.01□□□□□ -1.13
KRTAP4-1Q9BYQ7 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC8.01□□□□□ -1.13
KRTAP4-1Q9BYQ7 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
KRTAP4-1Q9BYQ7 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
KRTAP4-1Q9BYQ7 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC8.01□□□□□ -1.13
KRTAP4-1Q9BYQ7 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC8.01□□□□□ -1.13
KRTAP4-1Q9BYQ7 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
KRTAP4-1Q9BYQ7 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC8.01□□□□□ -1.13
KRTAP4-1Q9BYQ7 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
KRTAP4-1Q9BYQ7 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC8□□□□□ -1.13
KRTAP4-1Q9BYQ7 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC8□□□□□ -1.13
KRTAP4-1Q9BYQ7 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC8□□□□□ -1.13
KRTAP4-1Q9BYQ7 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC8□□□□□ -1.13
KRTAP4-1Q9BYQ7 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC8□□□□□ -1.13
KRTAP4-1Q9BYQ7 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
KRTAP4-1Q9BYQ7 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC8□□□□□ -1.13
KRTAP4-1Q9BYQ7 AC009090.5-201ENST00000624886 2285 ntBASIC8□□□□□ -1.13
KRTAP4-1Q9BYQ7 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC8□□□□□ -1.13
KRTAP4-1Q9BYQ7 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
KRTAP4-1Q9BYQ7 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC8□□□□□ -1.13
KRTAP4-1Q9BYQ7 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
KRTAP4-1Q9BYQ7 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
KRTAP4-1Q9BYQ7 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC8□□□□□ -1.13
KRTAP4-1Q9BYQ7 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
KRTAP4-1Q9BYQ7 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC8□□□□□ -1.13
KRTAP4-1Q9BYQ7 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC8□□□□□ -1.13
KRTAP4-1Q9BYQ7 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC8□□□□□ -1.13
KRTAP4-1Q9BYQ7 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC8□□□□□ -1.13
KRTAP4-1Q9BYQ7 DPM3-202ENST00000368399 517 ntBASIC8□□□□□ -1.13
KRTAP4-1Q9BYQ7 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC8□□□□□ -1.13
KRTAP4-1Q9BYQ7 UFM1-202ENST00000379649 846 ntTSL 4 BASIC8□□□□□ -1.13
KRTAP4-1Q9BYQ7 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC8□□□□□ -1.13
KRTAP4-1Q9BYQ7 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC8□□□□□ -1.13
KRTAP4-1Q9BYQ7 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC8□□□□□ -1.13
KRTAP4-1Q9BYQ7 AL354877.1-201ENST00000424412 413 ntBASIC8□□□□□ -1.13
KRTAP4-1Q9BYQ7 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC8□□□□□ -1.13
KRTAP4-1Q9BYQ7 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC8□□□□□ -1.13
KRTAP4-1Q9BYQ7 AC069218.1-201ENST00000435269 762 ntBASIC8□□□□□ -1.13
KRTAP4-1Q9BYQ7 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC8□□□□□ -1.13
KRTAP4-1Q9BYQ7 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
KRTAP4-1Q9BYQ7 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC8□□□□□ -1.13
KRTAP4-1Q9BYQ7 RN7SL11P-201ENST00000471305 293 ntBASIC8□□□□□ -1.13
KRTAP4-1Q9BYQ7 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC8□□□□□ -1.13
KRTAP4-1Q9BYQ7 TMEM198B-204ENST00000484016 896 ntBASIC8□□□□□ -1.13
KRTAP4-1Q9BYQ7 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
KRTAP4-1Q9BYQ7 NUP210P1-202ENST00000504322 710 ntBASIC8□□□□□ -1.13
KRTAP4-1Q9BYQ7 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC8□□□□□ -1.13
KRTAP4-1Q9BYQ7 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC8□□□□□ -1.13
KRTAP4-1Q9BYQ7 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC8□□□□□ -1.13
KRTAP4-1Q9BYQ7 CFL1-214ENST00000534769 758 ntTSL 2 BASIC8□□□□□ -1.13
KRTAP4-1Q9BYQ7 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC8□□□□□ -1.13
KRTAP4-1Q9BYQ7 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC8□□□□□ -1.13
KRTAP4-1Q9BYQ7 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC8□□□□□ -1.13
KRTAP4-1Q9BYQ7 PRKXP1-201ENST00000561423 1122 ntBASIC8□□□□□ -1.13
KRTAP4-1Q9BYQ7 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC8□□□□□ -1.13
KRTAP4-1Q9BYQ7 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC8□□□□□ -1.13
KRTAP4-1Q9BYQ7 MIR4683-201ENST00000579659 81 ntBASIC8□□□□□ -1.13
KRTAP4-1Q9BYQ7 NAT9-222ENST00000583476 583 ntTSL 3 BASIC8□□□□□ -1.13
KRTAP4-1Q9BYQ7 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC8□□□□□ -1.13
KRTAP4-1Q9BYQ7 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC8□□□□□ -1.13
KRTAP4-1Q9BYQ7 AP000346.4-201ENST00000614827 381 ntBASIC8□□□□□ -1.13
KRTAP4-1Q9BYQ7 CU633904.3-201ENST00000624042 1029 ntBASIC8□□□□□ -1.13
KRTAP4-1Q9BYQ7 CDK7-214ENST00000626796 358 ntTSL 5 BASIC8□□□□□ -1.13
KRTAP4-1Q9BYQ7 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC8□□□□□ -1.13
KRTAP4-1Q9BYQ7 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC8□□□□□ -1.13
KRTAP4-1Q9BYQ7 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC8□□□□□ -1.13
KRTAP4-1Q9BYQ7 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC8□□□□□ -1.13
KRTAP4-1Q9BYQ7 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
KRTAP4-1Q9BYQ7 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
KRTAP4-1Q9BYQ7 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC8□□□□□ -1.13
KRTAP4-1Q9BYQ7 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC8□□□□□ -1.13
KRTAP4-1Q9BYQ7 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
KRTAP4-1Q9BYQ7 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
KRTAP4-1Q9BYQ7 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC8□□□□□ -1.13
KRTAP4-1Q9BYQ7 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
KRTAP4-1Q9BYQ7 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC8□□□□□ -1.13
KRTAP4-1Q9BYQ7 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC8□□□□□ -1.13
KRTAP4-1Q9BYQ7 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC8□□□□□ -1.13
KRTAP4-1Q9BYQ7 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC8□□□□□ -1.13
KRTAP4-1Q9BYQ7 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
KRTAP4-1Q9BYQ7 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
KRTAP4-1Q9BYQ7 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
KRTAP4-1Q9BYQ7 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC8□□□□□ -1.13
KRTAP4-1Q9BYQ7 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
KRTAP4-1Q9BYQ7 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
KRTAP4-1Q9BYQ7 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
KRTAP4-1Q9BYQ7 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC8□□□□□ -1.13
KRTAP4-1Q9BYQ7 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC8□□□□□ -1.13
KRTAP4-1Q9BYQ7 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
KRTAP4-1Q9BYQ7 CLUHP2-201ENST00000426660 1303 ntBASIC8□□□□□ -1.13
KRTAP4-1Q9BYQ7 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC8□□□□□ -1.13
KRTAP4-1Q9BYQ7 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
KRTAP4-1Q9BYQ7 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC8□□□□□ -1.13
KRTAP4-1Q9BYQ7 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
KRTAP4-1Q9BYQ7 ANKRD30BP2-201ENST00000435744 1610 ntBASIC8□□□□□ -1.13
KRTAP4-1Q9BYQ7 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
KRTAP4-1Q9BYQ7 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC7.99□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms