Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.22□□□□□ -0.13
USB1Q9BQ65 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.22□□□□□ -0.13
USB1Q9BQ65 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
USB1Q9BQ65 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
USB1Q9BQ65 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
USB1Q9BQ65 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
USB1Q9BQ65 AC245100.5-201ENST00000452108 331 ntBASIC14.22□□□□□ -0.13
USB1Q9BQ65 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
USB1Q9BQ65 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.22□□□□□ -0.13
USB1Q9BQ65 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.22□□□□□ -0.13
USB1Q9BQ65 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
USB1Q9BQ65 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC14.22□□□□□ -0.13
USB1Q9BQ65 MIR4745-201ENST00000577608 62 ntBASIC14.22□□□□□ -0.13
USB1Q9BQ65 AC009118.2-201ENST00000613275 655 ntBASIC14.22□□□□□ -0.13
USB1Q9BQ65 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
USB1Q9BQ65 AL390754.1-201ENST00000619088 582 ntBASIC14.22□□□□□ -0.13
USB1Q9BQ65 AL356094.1-201ENST00000624663 1212 ntBASIC14.22□□□□□ -0.13
USB1Q9BQ65 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.22□□□□□ -0.13
USB1Q9BQ65 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
USB1Q9BQ65 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
USB1Q9BQ65 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.22□□□□□ -0.13
USB1Q9BQ65 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
USB1Q9BQ65 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC14.22□□□□□ -0.13
USB1Q9BQ65 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
USB1Q9BQ65 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.22□□□□□ -0.13
USB1Q9BQ65 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
USB1Q9BQ65 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.22□□□□□ -0.13
USB1Q9BQ65 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
USB1Q9BQ65 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
USB1Q9BQ65 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
USB1Q9BQ65 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC14.22□□□□□ -0.13
USB1Q9BQ65 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC14.22□□□□□ -0.13
USB1Q9BQ65 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
USB1Q9BQ65 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
USB1Q9BQ65 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.21□□□□□ -0.13
USB1Q9BQ65 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
USB1Q9BQ65 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
USB1Q9BQ65 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
USB1Q9BQ65 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC14.21□□□□□ -0.13
USB1Q9BQ65 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
USB1Q9BQ65 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
USB1Q9BQ65 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.21□□□□□ -0.13
USB1Q9BQ65 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
USB1Q9BQ65 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
USB1Q9BQ65 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
USB1Q9BQ65 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
USB1Q9BQ65 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC14.21□□□□□ -0.13
USB1Q9BQ65 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
USB1Q9BQ65 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC14.21□□□□□ -0.13
USB1Q9BQ65 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
USB1Q9BQ65 LINC01513-201ENST00000416930 483 ntTSL 2 BASIC14.21□□□□□ -0.13
USB1Q9BQ65 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC14.21□□□□□ -0.13
USB1Q9BQ65 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC14.21□□□□□ -0.13
USB1Q9BQ65 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC14.21□□□□□ -0.13
USB1Q9BQ65 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.21□□□□□ -0.13
USB1Q9BQ65 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
USB1Q9BQ65 ACTR6P1-201ENST00000514311 1104 ntBASIC14.21□□□□□ -0.13
USB1Q9BQ65 ZNF890P-202ENST00000530367 1156 ntBASIC14.21□□□□□ -0.13
USB1Q9BQ65 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
USB1Q9BQ65 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
USB1Q9BQ65 AC022087.1-201ENST00000558372 612 ntTSL 3 BASIC14.21□□□□□ -0.13
USB1Q9BQ65 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.21□□□□□ -0.13
USB1Q9BQ65 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.21□□□□□ -0.13
USB1Q9BQ65 MIR4321-201ENST00000592276 80 ntBASIC14.21□□□□□ -0.13
USB1Q9BQ65 AC144521.1-201ENST00000607148 956 ntBASIC14.21□□□□□ -0.13
USB1Q9BQ65 AC073575.2-201ENST00000614212 627 ntBASIC14.21□□□□□ -0.13
USB1Q9BQ65 AL590560.3-201ENST00000623350 461 ntBASIC14.21□□□□□ -0.13
USB1Q9BQ65 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.21□□□□□ -0.13
USB1Q9BQ65 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
USB1Q9BQ65 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
USB1Q9BQ65 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
USB1Q9BQ65 CYP2T1P-202ENST00000641596 2535 ntBASIC14.21□□□□□ -0.13
USB1Q9BQ65 AC092384.3-202ENST00000564646 2873 ntBASIC14.21□□□□□ -0.13
USB1Q9BQ65 AC100757.3-201ENST00000622361 1406 ntBASIC14.21□□□□□ -0.13
USB1Q9BQ65 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.21□□□□□ -0.13
USB1Q9BQ65 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC14.21□□□□□ -0.14
USB1Q9BQ65 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
USB1Q9BQ65 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
USB1Q9BQ65 AC005622.1-201ENST00000636801 1703 ntBASIC14.21□□□□□ -0.14
USB1Q9BQ65 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
USB1Q9BQ65 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
USB1Q9BQ65 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.2□□□□□ -0.14
USB1Q9BQ65 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
USB1Q9BQ65 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC14.2□□□□□ -0.14
USB1Q9BQ65 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
USB1Q9BQ65 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
USB1Q9BQ65 BTBD7P1-201ENST00000447253 1453 ntBASIC14.2□□□□□ -0.14
USB1Q9BQ65 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
USB1Q9BQ65 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
USB1Q9BQ65 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
USB1Q9BQ65 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.2□□□□□ -0.14
USB1Q9BQ65 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC14.2□□□□□ -0.14
USB1Q9BQ65 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
USB1Q9BQ65 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
USB1Q9BQ65 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC14.2□□□□□ -0.14
USB1Q9BQ65 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
USB1Q9BQ65 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
USB1Q9BQ65 SPDYE17-201ENST00000412399 783 ntBASIC14.2□□□□□ -0.14
USB1Q9BQ65 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.2□□□□□ -0.14
USB1Q9BQ65 AC092580.3-201ENST00000430932 139 ntBASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms