Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
TM9SF2Q99805 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
TM9SF2Q99805 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.71□□□□□ -0.06
TM9SF2Q99805 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
TM9SF2Q99805 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.71□□□□□ -0.06
TM9SF2Q99805 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
TM9SF2Q99805 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
TM9SF2Q99805 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
TM9SF2Q99805 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
TM9SF2Q99805 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
TM9SF2Q99805 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
TM9SF2Q99805 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
TM9SF2Q99805 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
TM9SF2Q99805 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.7□□□□□ -0.06
TM9SF2Q99805 AC023157.3-201ENST00000619086 2088 ntBASIC14.7□□□□□ -0.06
TM9SF2Q99805 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.7□□□□□ -0.06
TM9SF2Q99805 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TM9SF2Q99805 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TM9SF2Q99805 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TM9SF2Q99805 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.7□□□□□ -0.06
TM9SF2Q99805 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TM9SF2Q99805 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TM9SF2Q99805 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.7□□□□□ -0.06
TM9SF2Q99805 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TM9SF2Q99805 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TM9SF2Q99805 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TM9SF2Q99805 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TM9SF2Q99805 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
TM9SF2Q99805 HLA-H-201ENST00000383620 1096 ntBASIC14.7□□□□□ -0.06
TM9SF2Q99805 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.7□□□□□ -0.06
TM9SF2Q99805 MIR943-201ENST00000401286 94 ntBASIC14.7□□□□□ -0.06
TM9SF2Q99805 FAM8A3P-201ENST00000427218 844 ntBASIC14.7□□□□□ -0.06
TM9SF2Q99805 BASP1P1-201ENST00000430708 665 ntBASIC14.7□□□□□ -0.06
TM9SF2Q99805 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.7□□□□□ -0.06
TM9SF2Q99805 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.7□□□□□ -0.06
TM9SF2Q99805 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TM9SF2Q99805 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.7□□□□□ -0.06
TM9SF2Q99805 DUX4L27-201ENST00000554796 1261 ntBASIC14.7□□□□□ -0.06
TM9SF2Q99805 MIR3197-201ENST00000582241 73 ntBASIC14.7□□□□□ -0.06
TM9SF2Q99805 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.7□□□□□ -0.06
TM9SF2Q99805 AL096865.1-201ENST00000606796 927 ntBASIC14.7□□□□□ -0.06
TM9SF2Q99805 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.7□□□□□ -0.06
TM9SF2Q99805 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.7□□□□□ -0.06
TM9SF2Q99805 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TM9SF2Q99805 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
TM9SF2Q99805 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
TM9SF2Q99805 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TM9SF2Q99805 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TM9SF2Q99805 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TM9SF2Q99805 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
TM9SF2Q99805 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TM9SF2Q99805 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TM9SF2Q99805 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TM9SF2Q99805 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.7□□□□□ -0.06
TM9SF2Q99805 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.7□□□□□ -0.06
TM9SF2Q99805 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.7□□□□□ -0.06
TM9SF2Q99805 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TM9SF2Q99805 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
TM9SF2Q99805 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.69□□□□□ -0.06
TM9SF2Q99805 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
TM9SF2Q99805 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.69□□□□□ -0.06
TM9SF2Q99805 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TM9SF2Q99805 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.69□□□□□ -0.06
TM9SF2Q99805 AC069224.1-201ENST00000566372 1715 ntBASIC14.69□□□□□ -0.06
TM9SF2Q99805 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TM9SF2Q99805 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
TM9SF2Q99805 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
TM9SF2Q99805 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.69□□□□□ -0.06
TM9SF2Q99805 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TM9SF2Q99805 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.69□□□□□ -0.06
TM9SF2Q99805 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TM9SF2Q99805 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TM9SF2Q99805 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
TM9SF2Q99805 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TM9SF2Q99805 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.69□□□□□ -0.06
TM9SF2Q99805 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TM9SF2Q99805 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TM9SF2Q99805 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
TM9SF2Q99805 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TM9SF2Q99805 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TM9SF2Q99805 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.69□□□□□ -0.06
TM9SF2Q99805 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.69□□□□□ -0.06
TM9SF2Q99805 AC055876.3-201ENST00000431496 288 ntBASIC14.69□□□□□ -0.06
TM9SF2Q99805 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.69□□□□□ -0.06
TM9SF2Q99805 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
TM9SF2Q99805 AC093214.1-201ENST00000511688 1107 ntBASIC14.69□□□□□ -0.06
TM9SF2Q99805 RARRES2P9-201ENST00000565168 469 ntBASIC14.69□□□□□ -0.06
TM9SF2Q99805 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.69□□□□□ -0.06
TM9SF2Q99805 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.69□□□□□ -0.06
TM9SF2Q99805 AC005498.2-205ENST00000593218 784 ntBASIC14.69□□□□□ -0.06
TM9SF2Q99805 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.69□□□□□ -0.06
TM9SF2Q99805 AC138649.4-201ENST00000612222 287 ntBASIC14.69□□□□□ -0.06
TM9SF2Q99805 AC018529.1-201ENST00000613063 361 ntBASIC14.69□□□□□ -0.06
TM9SF2Q99805 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TM9SF2Q99805 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.69□□□□□ -0.06
TM9SF2Q99805 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
TM9SF2Q99805 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.69□□□□□ -0.06
TM9SF2Q99805 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TM9SF2Q99805 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TM9SF2Q99805 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms