Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
ABCA3Q99758 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ABCA3Q99758 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
ABCA3Q99758 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ABCA3Q99758 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
ABCA3Q99758 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC20.32■□□□□ 0.84
ABCA3Q99758 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ABCA3Q99758 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ABCA3Q99758 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ABCA3Q99758 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC20.31■□□□□ 0.84
ABCA3Q99758 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
ABCA3Q99758 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
ABCA3Q99758 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ABCA3Q99758 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ABCA3Q99758 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
ABCA3Q99758 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
ABCA3Q99758 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC20.31■□□□□ 0.84
ABCA3Q99758 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
ABCA3Q99758 RPS9P1-201ENST00000419943 583 ntBASIC20.31■□□□□ 0.84
ABCA3Q99758 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC20.31■□□□□ 0.84
ABCA3Q99758 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC20.31■□□□□ 0.84
ABCA3Q99758 AC141586.1-203ENST00000567242 366 ntBASIC20.31■□□□□ 0.84
ABCA3Q99758 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC20.31■□□□□ 0.84
ABCA3Q99758 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
ABCA3Q99758 NAT9-211ENST00000580632 799 ntTSL 3 BASIC20.31■□□□□ 0.84
ABCA3Q99758 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC20.31■□□□□ 0.84
ABCA3Q99758 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC20.31■□□□□ 0.84
ABCA3Q99758 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ABCA3Q99758 FLJ38576-201ENST00000623820 2459 ntBASIC20.31■□□□□ 0.84
ABCA3Q99758 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ABCA3Q99758 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
ABCA3Q99758 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ABCA3Q99758 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC20.31■□□□□ 0.84
ABCA3Q99758 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC20.31■□□□□ 0.84
ABCA3Q99758 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC20.31■□□□□ 0.84
ABCA3Q99758 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
ABCA3Q99758 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ABCA3Q99758 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
ABCA3Q99758 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC20.3■□□□□ 0.84
ABCA3Q99758 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ABCA3Q99758 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC20.3■□□□□ 0.84
ABCA3Q99758 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ABCA3Q99758 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ABCA3Q99758 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC20.3■□□□□ 0.84
ABCA3Q99758 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC20.3■□□□□ 0.84
ABCA3Q99758 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ABCA3Q99758 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ABCA3Q99758 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ABCA3Q99758 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ABCA3Q99758 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC20.3■□□□□ 0.84
ABCA3Q99758 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC20.3■□□□□ 0.84
ABCA3Q99758 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC20.3■□□□□ 0.84
ABCA3Q99758 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
ABCA3Q99758 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC20.3■□□□□ 0.84
ABCA3Q99758 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC20.3■□□□□ 0.84
ABCA3Q99758 AC100827.2-201ENST00000563214 1194 ntBASIC20.3■□□□□ 0.84
ABCA3Q99758 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC20.3■□□□□ 0.84
ABCA3Q99758 MIR4649-201ENST00000582839 64 ntBASIC20.3■□□□□ 0.84
ABCA3Q99758 CMC2-224ENST00000630396 481 ntTSL 5 BASIC20.3■□□□□ 0.84
ABCA3Q99758 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
ABCA3Q99758 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ABCA3Q99758 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
ABCA3Q99758 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ABCA3Q99758 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ABCA3Q99758 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC20.3■□□□□ 0.84
ABCA3Q99758 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
ABCA3Q99758 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ABCA3Q99758 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
ABCA3Q99758 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ABCA3Q99758 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC20.3■□□□□ 0.84
ABCA3Q99758 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ABCA3Q99758 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ABCA3Q99758 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ABCA3Q99758 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ABCA3Q99758 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
ABCA3Q99758 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ABCA3Q99758 CDC23-208ENST00000505120 455 ntTSL 3 BASIC20.3■□□□□ 0.84
ABCA3Q99758 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ABCA3Q99758 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC20.3■□□□□ 0.84
ABCA3Q99758 MIR6842-201ENST00000612539 65 ntBASIC20.3■□□□□ 0.84
ABCA3Q99758 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ABCA3Q99758 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ABCA3Q99758 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
ABCA3Q99758 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ABCA3Q99758 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ABCA3Q99758 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ABCA3Q99758 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ABCA3Q99758 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ABCA3Q99758 CYP51A1P3-201ENST00000400072 1428 ntBASIC20.29■□□□□ 0.84
ABCA3Q99758 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ABCA3Q99758 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC20.29■□□□□ 0.84
ABCA3Q99758 AC026410.1-201ENST00000507366 1101 ntBASIC20.29■□□□□ 0.84
ABCA3Q99758 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
ABCA3Q99758 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ABCA3Q99758 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC20.29■□□□□ 0.84
ABCA3Q99758 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC20.29■□□□□ 0.84
ABCA3Q99758 AC005632.3-201ENST00000605544 308 ntBASIC20.29■□□□□ 0.84
ABCA3Q99758 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ABCA3Q99758 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC20.29■□□□□ 0.84
ABCA3Q99758 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms