Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
SNX18Q96RF0 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.43□□□□□ -0.1
SNX18Q96RF0 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC14.43□□□□□ -0.1
SNX18Q96RF0 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC14.43□□□□□ -0.1
SNX18Q96RF0 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.43□□□□□ -0.1
SNX18Q96RF0 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC14.43□□□□□ -0.1
SNX18Q96RF0 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SNX18Q96RF0 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
SNX18Q96RF0 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.43□□□□□ -0.1
SNX18Q96RF0 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC14.43□□□□□ -0.1
SNX18Q96RF0 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.43□□□□□ -0.1
SNX18Q96RF0 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SNX18Q96RF0 AP002472.1-201ENST00000577490 586 ntBASIC14.43□□□□□ -0.1
SNX18Q96RF0 AC024267.1-201ENST00000582320 895 ntBASIC14.43□□□□□ -0.1
SNX18Q96RF0 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC14.43□□□□□ -0.1
SNX18Q96RF0 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC14.43□□□□□ -0.1
SNX18Q96RF0 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SNX18Q96RF0 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SNX18Q96RF0 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.43□□□□□ -0.1
SNX18Q96RF0 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SNX18Q96RF0 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
SNX18Q96RF0 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.43□□□□□ -0.1
SNX18Q96RF0 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SNX18Q96RF0 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SNX18Q96RF0 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.43□□□□□ -0.1
SNX18Q96RF0 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.43□□□□□ -0.1
SNX18Q96RF0 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
SNX18Q96RF0 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.43□□□□□ -0.1
SNX18Q96RF0 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
SNX18Q96RF0 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC14.43□□□□□ -0.1
SNX18Q96RF0 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SNX18Q96RF0 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.43□□□□□ -0.1
SNX18Q96RF0 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.43□□□□□ -0.1
SNX18Q96RF0 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
SNX18Q96RF0 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.43□□□□□ -0.1
SNX18Q96RF0 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.43□□□□□ -0.1
SNX18Q96RF0 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.43□□□□□ -0.1
SNX18Q96RF0 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SNX18Q96RF0 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
SNX18Q96RF0 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SNX18Q96RF0 AL109954.1-202ENST00000564051 2148 ntBASIC14.42□□□□□ -0.1
SNX18Q96RF0 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SNX18Q96RF0 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
SNX18Q96RF0 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SNX18Q96RF0 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SNX18Q96RF0 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.42□□□□□ -0.1
SNX18Q96RF0 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SNX18Q96RF0 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.42□□□□□ -0.1
SNX18Q96RF0 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SNX18Q96RF0 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SNX18Q96RF0 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
SNX18Q96RF0 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SNX18Q96RF0 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC14.42□□□□□ -0.1
SNX18Q96RF0 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SNX18Q96RF0 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
SNX18Q96RF0 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.42□□□□□ -0.1
SNX18Q96RF0 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SNX18Q96RF0 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.42□□□□□ -0.1
SNX18Q96RF0 CICP23-201ENST00000605013 2741 ntBASIC14.42□□□□□ -0.1
SNX18Q96RF0 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
SNX18Q96RF0 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SNX18Q96RF0 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC14.42□□□□□ -0.1
SNX18Q96RF0 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.42□□□□□ -0.1
SNX18Q96RF0 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC14.42□□□□□ -0.1
SNX18Q96RF0 AC098859.1-201ENST00000502915 1238 ntBASIC14.42□□□□□ -0.1
SNX18Q96RF0 AC105233.2-201ENST00000523697 349 ntBASIC14.42□□□□□ -0.1
SNX18Q96RF0 AF228730.5-201ENST00000530288 346 ntBASIC14.42□□□□□ -0.1
SNX18Q96RF0 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.42□□□□□ -0.1
SNX18Q96RF0 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC14.42□□□□□ -0.1
SNX18Q96RF0 RARRES2P8-201ENST00000566335 367 ntBASIC14.42□□□□□ -0.1
SNX18Q96RF0 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC14.42□□□□□ -0.1
SNX18Q96RF0 MIR4469-201ENST00000583919 79 ntBASIC14.42□□□□□ -0.1
SNX18Q96RF0 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SNX18Q96RF0 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SNX18Q96RF0 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC14.42□□□□□ -0.1
SNX18Q96RF0 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.42□□□□□ -0.1
SNX18Q96RF0 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SNX18Q96RF0 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SNX18Q96RF0 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SNX18Q96RF0 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SNX18Q96RF0 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.42□□□□□ -0.1
SNX18Q96RF0 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.42□□□□□ -0.1
SNX18Q96RF0 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.42□□□□□ -0.1
SNX18Q96RF0 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SNX18Q96RF0 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SNX18Q96RF0 AC005912.2-201ENST00000619492 2400 ntBASIC14.42□□□□□ -0.1
SNX18Q96RF0 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SNX18Q96RF0 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
SNX18Q96RF0 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SNX18Q96RF0 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SNX18Q96RF0 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SNX18Q96RF0 REXO1L2P-201ENST00000425429 2069 ntBASIC14.42□□□□□ -0.1
SNX18Q96RF0 AKAP8P1-201ENST00000434743 1349 ntBASIC14.41□□□□□ -0.1
SNX18Q96RF0 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SNX18Q96RF0 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
SNX18Q96RF0 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SNX18Q96RF0 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
SNX18Q96RF0 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SNX18Q96RF0 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
SNX18Q96RF0 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms