Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
GAFA1Q96PS6 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
GAFA1Q96PS6 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC13.06□□□□□ -0.32
GAFA1Q96PS6 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
GAFA1Q96PS6 AC138969.3-201ENST00000546612 1459 ntBASIC13.06□□□□□ -0.32
GAFA1Q96PS6 AC138932.2-201ENST00000548268 1459 ntBASIC13.06□□□□□ -0.32
GAFA1Q96PS6 AC126755.4-201ENST00000549796 1459 ntBASIC13.06□□□□□ -0.32
GAFA1Q96PS6 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
GAFA1Q96PS6 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
GAFA1Q96PS6 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC13.06□□□□□ -0.32
GAFA1Q96PS6 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC13.06□□□□□ -0.32
GAFA1Q96PS6 TMBIM7P-203ENST00000641617 1718 ntBASIC13.06□□□□□ -0.32
GAFA1Q96PS6 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC13.06□□□□□ -0.32
GAFA1Q96PS6 AL133267.1-201ENST00000398220 340 ntBASIC13.06□□□□□ -0.32
GAFA1Q96PS6 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
GAFA1Q96PS6 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC13.06□□□□□ -0.32
GAFA1Q96PS6 KRT18P43-201ENST00000469825 1281 ntBASIC13.06□□□□□ -0.32
GAFA1Q96PS6 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC13.06□□□□□ -0.32
GAFA1Q96PS6 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
GAFA1Q96PS6 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
GAFA1Q96PS6 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC13.06□□□□□ -0.32
GAFA1Q96PS6 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC13.06□□□□□ -0.32
GAFA1Q96PS6 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC13.06□□□□□ -0.32
GAFA1Q96PS6 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
GAFA1Q96PS6 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC13.06□□□□□ -0.32
GAFA1Q96PS6 AL158212.4-201ENST00000624062 1286 ntBASIC13.06□□□□□ -0.32
GAFA1Q96PS6 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
GAFA1Q96PS6 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
GAFA1Q96PS6 AL121723.1-201ENST00000445194 1519 ntBASIC13.06□□□□□ -0.32
GAFA1Q96PS6 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
GAFA1Q96PS6 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
GAFA1Q96PS6 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC13.06□□□□□ -0.32
GAFA1Q96PS6 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
GAFA1Q96PS6 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
GAFA1Q96PS6 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
GAFA1Q96PS6 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
GAFA1Q96PS6 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
GAFA1Q96PS6 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC13.06□□□□□ -0.32
GAFA1Q96PS6 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC13.06□□□□□ -0.32
GAFA1Q96PS6 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC13.06□□□□□ -0.32
GAFA1Q96PS6 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
GAFA1Q96PS6 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC13.06□□□□□ -0.32
GAFA1Q96PS6 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
GAFA1Q96PS6 LCK-206ENST00000373564 2137 ntTSL 5 BASIC13.06□□□□□ -0.32
GAFA1Q96PS6 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
GAFA1Q96PS6 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
GAFA1Q96PS6 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
GAFA1Q96PS6 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
GAFA1Q96PS6 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
GAFA1Q96PS6 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC13.05□□□□□ -0.32
GAFA1Q96PS6 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.05□□□□□ -0.32
GAFA1Q96PS6 TK1-203ENST00000588734 1681 ntTSL 2 BASIC13.05□□□□□ -0.32
GAFA1Q96PS6 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC13.05□□□□□ -0.32
GAFA1Q96PS6 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC13.05□□□□□ -0.32
GAFA1Q96PS6 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
GAFA1Q96PS6 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
GAFA1Q96PS6 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
GAFA1Q96PS6 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
GAFA1Q96PS6 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
GAFA1Q96PS6 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
GAFA1Q96PS6 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
GAFA1Q96PS6 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
GAFA1Q96PS6 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
GAFA1Q96PS6 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
GAFA1Q96PS6 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
GAFA1Q96PS6 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
GAFA1Q96PS6 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC13.05□□□□□ -0.32
GAFA1Q96PS6 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
GAFA1Q96PS6 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
GAFA1Q96PS6 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
GAFA1Q96PS6 SPDYE19P-201ENST00000338590 713 ntBASIC13.05□□□□□ -0.32
GAFA1Q96PS6 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC13.05□□□□□ -0.32
GAFA1Q96PS6 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
GAFA1Q96PS6 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
GAFA1Q96PS6 PKIG-203ENST00000372887 769 ntTSL 3 BASIC13.05□□□□□ -0.32
GAFA1Q96PS6 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
GAFA1Q96PS6 MIR661-201ENST00000384842 89 ntBASIC13.05□□□□□ -0.32
GAFA1Q96PS6 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
GAFA1Q96PS6 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.05□□□□□ -0.32
GAFA1Q96PS6 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC13.05□□□□□ -0.32
GAFA1Q96PS6 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
GAFA1Q96PS6 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC13.05□□□□□ -0.32
GAFA1Q96PS6 GNAQP1-201ENST00000444815 1067 ntBASIC13.05□□□□□ -0.32
GAFA1Q96PS6 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC13.05□□□□□ -0.32
GAFA1Q96PS6 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC13.05□□□□□ -0.32
GAFA1Q96PS6 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
GAFA1Q96PS6 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC13.05□□□□□ -0.32
GAFA1Q96PS6 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC13.05□□□□□ -0.32
GAFA1Q96PS6 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
GAFA1Q96PS6 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
GAFA1Q96PS6 HADH-212ENST00000638621 741 ntTSL 5 BASIC13.05□□□□□ -0.32
GAFA1Q96PS6 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
GAFA1Q96PS6 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
GAFA1Q96PS6 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
GAFA1Q96PS6 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
GAFA1Q96PS6 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
GAFA1Q96PS6 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
GAFA1Q96PS6 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
GAFA1Q96PS6 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
GAFA1Q96PS6 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms