Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.94■□□□□ 0.3
LRCH3Q96II8 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LRCH3Q96II8 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRCH3Q96II8 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
LRCH3Q96II8 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRCH3Q96II8 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.94■□□□□ 0.3
LRCH3Q96II8 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LRCH3Q96II8 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LRCH3Q96II8 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.94■□□□□ 0.3
LRCH3Q96II8 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRCH3Q96II8 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
LRCH3Q96II8 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LRCH3Q96II8 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LRCH3Q96II8 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
LRCH3Q96II8 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
LRCH3Q96II8 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC16.94■□□□□ 0.3
LRCH3Q96II8 TOMM22P5-201ENST00000416399 439 ntBASIC16.94■□□□□ 0.3
LRCH3Q96II8 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC16.94■□□□□ 0.3
LRCH3Q96II8 TARDBPP1-201ENST00000442013 1203 ntBASIC16.94■□□□□ 0.3
LRCH3Q96II8 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC16.94■□□□□ 0.3
LRCH3Q96II8 AP001582.1-201ENST00000525856 295 ntBASIC16.94■□□□□ 0.3
LRCH3Q96II8 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC16.94■□□□□ 0.3
LRCH3Q96II8 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC16.94■□□□□ 0.3
LRCH3Q96II8 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC16.94■□□□□ 0.3
LRCH3Q96II8 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC16.94■□□□□ 0.3
LRCH3Q96II8 AC087045.2-201ENST00000606279 1003 ntBASIC16.94■□□□□ 0.3
LRCH3Q96II8 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC16.94■□□□□ 0.3
LRCH3Q96II8 BNIP3P41-202ENST00000616656 861 ntBASIC16.94■□□□□ 0.3
LRCH3Q96II8 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC16.94■□□□□ 0.3
LRCH3Q96II8 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LRCH3Q96II8 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
LRCH3Q96II8 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRCH3Q96II8 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRCH3Q96II8 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRCH3Q96II8 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRCH3Q96II8 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.94■□□□□ 0.3
LRCH3Q96II8 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRCH3Q96II8 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRCH3Q96II8 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
LRCH3Q96II8 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC16.93■□□□□ 0.3
LRCH3Q96II8 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LRCH3Q96II8 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
LRCH3Q96II8 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRCH3Q96II8 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LRCH3Q96II8 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRCH3Q96II8 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRCH3Q96II8 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRCH3Q96II8 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.93■□□□□ 0.3
LRCH3Q96II8 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LRCH3Q96II8 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRCH3Q96II8 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRCH3Q96II8 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRCH3Q96II8 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
LRCH3Q96II8 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LRCH3Q96II8 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC16.93■□□□□ 0.3
LRCH3Q96II8 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC16.93■□□□□ 0.3
LRCH3Q96II8 CNN2P10-201ENST00000443067 918 ntBASIC16.93■□□□□ 0.3
LRCH3Q96II8 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LRCH3Q96II8 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC16.93■□□□□ 0.3
LRCH3Q96II8 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC16.93■□□□□ 0.3
LRCH3Q96II8 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC16.93■□□□□ 0.3
LRCH3Q96II8 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.93■□□□□ 0.3
LRCH3Q96II8 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRCH3Q96II8 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRCH3Q96II8 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRCH3Q96II8 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRCH3Q96II8 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRCH3Q96II8 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRCH3Q96II8 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRCH3Q96II8 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRCH3Q96II8 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRCH3Q96II8 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LRCH3Q96II8 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRCH3Q96II8 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
LRCH3Q96II8 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRCH3Q96II8 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRCH3Q96II8 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRCH3Q96II8 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRCH3Q96II8 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRCH3Q96II8 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRCH3Q96II8 SMS-201ENST00000379404 1174 ntTSL 3 BASIC16.92■□□□□ 0.3
LRCH3Q96II8 TISP43-201ENST00000409793 538 ntTSL 4 BASIC16.92■□□□□ 0.3
LRCH3Q96II8 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
LRCH3Q96II8 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC16.92■□□□□ 0.3
LRCH3Q96II8 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC16.92■□□□□ 0.3
LRCH3Q96II8 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.92■□□□□ 0.3
LRCH3Q96II8 AC019193.1-201ENST00000506678 823 ntBASIC16.92■□□□□ 0.3
LRCH3Q96II8 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
LRCH3Q96II8 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRCH3Q96II8 RNF41-210ENST00000552244 716 ntTSL 3 BASIC16.92■□□□□ 0.3
LRCH3Q96II8 CENPX-208ENST00000584347 799 ntTSL 2 BASIC16.92■□□□□ 0.3
LRCH3Q96II8 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC16.92■□□□□ 0.3
LRCH3Q96II8 AC127024.7-201ENST00000625101 200 ntBASIC16.92■□□□□ 0.3
LRCH3Q96II8 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC16.92■□□□□ 0.3
LRCH3Q96II8 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LRCH3Q96II8 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
LRCH3Q96II8 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRCH3Q96II8 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRCH3Q96II8 FLJ38576-201ENST00000623820 2459 ntBASIC16.92■□□□□ 0.3
LRCH3Q96II8 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms