Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 CICP4-201ENST00000447359 2812 ntBASIC16.31■□□□□ 0.2
IFT43Q96FT9 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
IFT43Q96FT9 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
IFT43Q96FT9 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
IFT43Q96FT9 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
IFT43Q96FT9 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
IFT43Q96FT9 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
IFT43Q96FT9 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
IFT43Q96FT9 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
IFT43Q96FT9 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
IFT43Q96FT9 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.3■□□□□ 0.2
IFT43Q96FT9 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC16.3■□□□□ 0.2
IFT43Q96FT9 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
IFT43Q96FT9 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
IFT43Q96FT9 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
IFT43Q96FT9 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
IFT43Q96FT9 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.3■□□□□ 0.2
IFT43Q96FT9 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
IFT43Q96FT9 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
IFT43Q96FT9 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.3■□□□□ 0.2
IFT43Q96FT9 AL139010.1-201ENST00000454878 894 ntBASIC16.3■□□□□ 0.2
IFT43Q96FT9 OARD1-208ENST00000469104 704 ntTSL 2 BASIC16.3■□□□□ 0.2
IFT43Q96FT9 TAF8-206ENST00000472818 719 ntTSL 2 BASIC16.3■□□□□ 0.2
IFT43Q96FT9 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.3■□□□□ 0.2
IFT43Q96FT9 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC16.3■□□□□ 0.2
IFT43Q96FT9 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.3■□□□□ 0.2
IFT43Q96FT9 AC003101.2-201ENST00000612557 442 ntBASIC16.3■□□□□ 0.2
IFT43Q96FT9 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC16.3■□□□□ 0.2
IFT43Q96FT9 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
IFT43Q96FT9 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.3■□□□□ 0.2
IFT43Q96FT9 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
IFT43Q96FT9 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
IFT43Q96FT9 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
IFT43Q96FT9 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
IFT43Q96FT9 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
IFT43Q96FT9 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
IFT43Q96FT9 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.3■□□□□ 0.2
IFT43Q96FT9 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
IFT43Q96FT9 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC16.29■□□□□ 0.2
IFT43Q96FT9 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
IFT43Q96FT9 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
IFT43Q96FT9 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
IFT43Q96FT9 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
IFT43Q96FT9 AC112504.1-201ENST00000623415 1841 ntBASIC16.29■□□□□ 0.2
IFT43Q96FT9 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
IFT43Q96FT9 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
IFT43Q96FT9 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
IFT43Q96FT9 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.29■□□□□ 0.2
IFT43Q96FT9 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
IFT43Q96FT9 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
IFT43Q96FT9 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
IFT43Q96FT9 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
IFT43Q96FT9 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
IFT43Q96FT9 AC022532.1-201ENST00000624563 1728 ntBASIC16.29■□□□□ 0.2
IFT43Q96FT9 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
IFT43Q96FT9 AC241585.1-201ENST00000433527 519 ntBASIC16.29■□□□□ 0.2
IFT43Q96FT9 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.29■□□□□ 0.2
IFT43Q96FT9 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
IFT43Q96FT9 AC002472.2-201ENST00000442739 958 ntBASIC16.29■□□□□ 0.2
IFT43Q96FT9 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
IFT43Q96FT9 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.29■□□□□ 0.2
IFT43Q96FT9 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
IFT43Q96FT9 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
IFT43Q96FT9 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.29■□□□□ 0.2
IFT43Q96FT9 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.29■□□□□ 0.2
IFT43Q96FT9 AL390754.1-201ENST00000619088 582 ntBASIC16.29■□□□□ 0.2
IFT43Q96FT9 AC012183.1-201ENST00000625197 499 ntBASIC16.29■□□□□ 0.2
IFT43Q96FT9 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
IFT43Q96FT9 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.29■□□□□ 0.2
IFT43Q96FT9 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
IFT43Q96FT9 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.29■□□□□ 0.2
IFT43Q96FT9 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
IFT43Q96FT9 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
IFT43Q96FT9 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
IFT43Q96FT9 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
IFT43Q96FT9 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
IFT43Q96FT9 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
IFT43Q96FT9 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
IFT43Q96FT9 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
IFT43Q96FT9 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
IFT43Q96FT9 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
IFT43Q96FT9 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
IFT43Q96FT9 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.29■□□□□ 0.2
IFT43Q96FT9 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
IFT43Q96FT9 AP003680.1-201ENST00000598970 3660 ntBASIC16.29■□□□□ 0.2
IFT43Q96FT9 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
IFT43Q96FT9 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.29■□□□□ 0.2
IFT43Q96FT9 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
IFT43Q96FT9 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC16.28■□□□□ 0.2
IFT43Q96FT9 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.28■□□□□ 0.2
IFT43Q96FT9 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
IFT43Q96FT9 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
IFT43Q96FT9 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
IFT43Q96FT9 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
IFT43Q96FT9 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
IFT43Q96FT9 AL035456.1-201ENST00000456064 1369 ntBASIC16.28■□□□□ 0.2
IFT43Q96FT9 AC134407.2-201ENST00000625089 1978 ntBASIC16.28■□□□□ 0.2
IFT43Q96FT9 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
IFT43Q96FT9 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
IFT43Q96FT9 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms