Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC18.13■□□□□ 0.49
CDCA5Q96FF9 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC18.13■□□□□ 0.49
CDCA5Q96FF9 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC18.13■□□□□ 0.49
CDCA5Q96FF9 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC18.13■□□□□ 0.49
CDCA5Q96FF9 RNMTL1P1-201ENST00000454103 560 ntBASIC18.13■□□□□ 0.49
CDCA5Q96FF9 AC104784.1-201ENST00000473096 294 ntBASIC18.13■□□□□ 0.49
CDCA5Q96FF9 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDCA5Q96FF9 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC18.13■□□□□ 0.49
CDCA5Q96FF9 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC18.13■□□□□ 0.49
CDCA5Q96FF9 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC18.13■□□□□ 0.49
CDCA5Q96FF9 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC18.13■□□□□ 0.49
CDCA5Q96FF9 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC18.13■□□□□ 0.49
CDCA5Q96FF9 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDCA5Q96FF9 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDCA5Q96FF9 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDCA5Q96FF9 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDCA5Q96FF9 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDCA5Q96FF9 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC18.13■□□□□ 0.49
CDCA5Q96FF9 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CDCA5Q96FF9 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDCA5Q96FF9 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDCA5Q96FF9 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.13■□□□□ 0.49
CDCA5Q96FF9 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CDCA5Q96FF9 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC18.13■□□□□ 0.49
CDCA5Q96FF9 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.13■□□□□ 0.49
CDCA5Q96FF9 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDCA5Q96FF9 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDCA5Q96FF9 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
CDCA5Q96FF9 AC106886.4-201ENST00000623557 2502 ntBASIC18.12■□□□□ 0.49
CDCA5Q96FF9 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDCA5Q96FF9 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CDCA5Q96FF9 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDCA5Q96FF9 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDCA5Q96FF9 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
CDCA5Q96FF9 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDCA5Q96FF9 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC18.12■□□□□ 0.49
CDCA5Q96FF9 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC18.12■□□□□ 0.49
CDCA5Q96FF9 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CDCA5Q96FF9 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDCA5Q96FF9 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CDCA5Q96FF9 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CDCA5Q96FF9 AL355334.1-201ENST00000417713 215 ntBASIC18.12■□□□□ 0.49
CDCA5Q96FF9 CMC1-204ENST00000423894 549 ntTSL 2 BASIC18.12■□□□□ 0.49
CDCA5Q96FF9 AC234782.1-201ENST00000451950 919 ntBASIC18.12■□□□□ 0.49
CDCA5Q96FF9 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC18.12■□□□□ 0.49
CDCA5Q96FF9 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC18.12■□□□□ 0.49
CDCA5Q96FF9 AC106794.1-201ENST00000506935 792 ntBASIC18.12■□□□□ 0.49
CDCA5Q96FF9 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC18.12■□□□□ 0.49
CDCA5Q96FF9 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC18.12■□□□□ 0.49
CDCA5Q96FF9 AC106820.3-201ENST00000561653 397 ntBASIC18.12■□□□□ 0.49
CDCA5Q96FF9 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC18.12■□□□□ 0.49
CDCA5Q96FF9 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDCA5Q96FF9 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC18.12■□□□□ 0.49
CDCA5Q96FF9 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDCA5Q96FF9 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDCA5Q96FF9 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDCA5Q96FF9 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDCA5Q96FF9 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDCA5Q96FF9 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
CDCA5Q96FF9 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
CDCA5Q96FF9 OR6D1P-202ENST00000641007 5290 ntBASIC18.12■□□□□ 0.49
CDCA5Q96FF9 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDCA5Q96FF9 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDCA5Q96FF9 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CDCA5Q96FF9 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDCA5Q96FF9 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC18.11■□□□□ 0.49
CDCA5Q96FF9 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CDCA5Q96FF9 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC18.11■□□□□ 0.49
CDCA5Q96FF9 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC18.11■□□□□ 0.49
CDCA5Q96FF9 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.11■□□□□ 0.49
CDCA5Q96FF9 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDCA5Q96FF9 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CDCA5Q96FF9 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDCA5Q96FF9 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CDCA5Q96FF9 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDCA5Q96FF9 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CDCA5Q96FF9 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
CDCA5Q96FF9 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDCA5Q96FF9 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDCA5Q96FF9 MIR648-201ENST00000385046 94 ntBASIC18.11■□□□□ 0.49
CDCA5Q96FF9 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CDCA5Q96FF9 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CDCA5Q96FF9 SLC16A6P1-201ENST00000413214 1059 ntBASIC18.11■□□□□ 0.49
CDCA5Q96FF9 LY6E-208ENST00000520531 490 ntTSL 2 BASIC18.11■□□□□ 0.49
CDCA5Q96FF9 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC18.11■□□□□ 0.49
CDCA5Q96FF9 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC18.11■□□□□ 0.49
CDCA5Q96FF9 BNIP3P13-201ENST00000599968 566 ntBASIC18.11■□□□□ 0.49
CDCA5Q96FF9 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDCA5Q96FF9 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC18.11■□□□□ 0.49
CDCA5Q96FF9 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC18.11■□□□□ 0.49
CDCA5Q96FF9 AL805961.1-203ENST00000641078 1258 ntBASIC18.11■□□□□ 0.49
CDCA5Q96FF9 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDCA5Q96FF9 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CDCA5Q96FF9 AC007787.1-201ENST00000588095 1583 ntBASIC18.11■□□□□ 0.49
CDCA5Q96FF9 AL158070.2-201ENST00000623713 1621 ntBASIC18.11■□□□□ 0.49
CDCA5Q96FF9 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDCA5Q96FF9 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDCA5Q96FF9 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CDCA5Q96FF9 AC006449.6-201ENST00000612330 2296 ntBASIC18.11■□□□□ 0.49
CDCA5Q96FF9 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms