Protein–RNA interactions for Protein: Q969V3

NCLN, Nicalin, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLNQ969V3 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NCLNQ969V3 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
NCLNQ969V3 TNRC18P2-201ENST00000417666 2714 ntBASIC15.37■□□□□ 0.05
NCLNQ969V3 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NCLNQ969V3 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.37■□□□□ 0.05
NCLNQ969V3 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.37■□□□□ 0.05
NCLNQ969V3 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
NCLNQ969V3 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.37■□□□□ 0.05
NCLNQ969V3 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC15.37■□□□□ 0.05
NCLNQ969V3 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
NCLNQ969V3 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
NCLNQ969V3 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
NCLNQ969V3 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15.37■□□□□ 0.05
NCLNQ969V3 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.37■□□□□ 0.05
NCLNQ969V3 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.37■□□□□ 0.05
NCLNQ969V3 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
NCLNQ969V3 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.37■□□□□ 0.05
NCLNQ969V3 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15.37■□□□□ 0.05
NCLNQ969V3 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC15.37■□□□□ 0.05
NCLNQ969V3 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC15.37■□□□□ 0.05
NCLNQ969V3 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC15.37■□□□□ 0.05
NCLNQ969V3 TSFM-210ENST00000550559 897 ntTSL 5 BASIC15.37■□□□□ 0.05
NCLNQ969V3 KRT8P23-201ENST00000560090 1207 ntBASIC15.37■□□□□ 0.05
NCLNQ969V3 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC15.37■□□□□ 0.05
NCLNQ969V3 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
NCLNQ969V3 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.37■□□□□ 0.05
NCLNQ969V3 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.37■□□□□ 0.05
NCLNQ969V3 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NCLNQ969V3 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NCLNQ969V3 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NCLNQ969V3 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
NCLNQ969V3 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.37■□□□□ 0.05
NCLNQ969V3 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
NCLNQ969V3 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NCLNQ969V3 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
NCLNQ969V3 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
NCLNQ969V3 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.36■□□□□ 0.05
NCLNQ969V3 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NCLNQ969V3 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.36■□□□□ 0.05
NCLNQ969V3 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.36■□□□□ 0.05
NCLNQ969V3 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NCLNQ969V3 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
NCLNQ969V3 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
NCLNQ969V3 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
NCLNQ969V3 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
NCLNQ969V3 AC099063.4-201ENST00000641099 1602 ntBASIC15.36■□□□□ 0.05
NCLNQ969V3 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
NCLNQ969V3 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.36■□□□□ 0.05
NCLNQ969V3 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
NCLNQ969V3 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
NCLNQ969V3 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NCLNQ969V3 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.36■□□□□ 0.05
NCLNQ969V3 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
NCLNQ969V3 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
NCLNQ969V3 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
NCLNQ969V3 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.36■□□□□ 0.05
NCLNQ969V3 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.36■□□□□ 0.05
NCLNQ969V3 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NCLNQ969V3 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NCLNQ969V3 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
NCLNQ969V3 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
NCLNQ969V3 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.36■□□□□ 0.05
NCLNQ969V3 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NCLNQ969V3 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.36■□□□□ 0.05
NCLNQ969V3 TSEN15P1-201ENST00000423257 515 ntBASIC15.36■□□□□ 0.05
NCLNQ969V3 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.36■□□□□ 0.05
NCLNQ969V3 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC15.36■□□□□ 0.05
NCLNQ969V3 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
NCLNQ969V3 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.36■□□□□ 0.05
NCLNQ969V3 PRYP6-201ENST00000514804 343 ntBASIC15.36■□□□□ 0.05
NCLNQ969V3 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NCLNQ969V3 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC15.36■□□□□ 0.05
NCLNQ969V3 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC15.36■□□□□ 0.05
NCLNQ969V3 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
NCLNQ969V3 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
NCLNQ969V3 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
NCLNQ969V3 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
NCLNQ969V3 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NCLNQ969V3 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
NCLNQ969V3 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
NCLNQ969V3 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
NCLNQ969V3 C8orf49-201ENST00000525043 1968 ntBASIC15.36■□□□□ 0.05
NCLNQ969V3 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.36■□□□□ 0.05
NCLNQ969V3 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
NCLNQ969V3 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
NCLNQ969V3 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.36■□□□□ 0.05
NCLNQ969V3 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
NCLNQ969V3 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.36■□□□□ 0.05
NCLNQ969V3 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.36■□□□□ 0.05
NCLNQ969V3 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NCLNQ969V3 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NCLNQ969V3 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NCLNQ969V3 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.36■□□□□ 0.05
NCLNQ969V3 AC023157.3-201ENST00000619086 2088 ntBASIC15.36■□□□□ 0.05
NCLNQ969V3 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC15.36■□□□□ 0.05
NCLNQ969V3 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NCLNQ969V3 AC136621.1-201ENST00000624017 2304 ntBASIC15.35■□□□□ 0.05
NCLNQ969V3 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NCLNQ969V3 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.35■□□□□ 0.05
NCLNQ969V3 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms