Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SCG3Q8WXD2 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SCG3Q8WXD2 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SCG3Q8WXD2 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SCG3Q8WXD2 AC112504.1-201ENST00000623415 1841 ntBASIC16.22■□□□□ 0.19
SCG3Q8WXD2 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.22■□□□□ 0.19
SCG3Q8WXD2 AP005117.1-202ENST00000581724 1908 ntBASIC16.22■□□□□ 0.19
SCG3Q8WXD2 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SCG3Q8WXD2 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
SCG3Q8WXD2 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
SCG3Q8WXD2 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SCG3Q8WXD2 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.22■□□□□ 0.19
SCG3Q8WXD2 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.22■□□□□ 0.19
SCG3Q8WXD2 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.22■□□□□ 0.19
SCG3Q8WXD2 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SCG3Q8WXD2 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.22■□□□□ 0.19
SCG3Q8WXD2 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.22■□□□□ 0.19
SCG3Q8WXD2 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.22■□□□□ 0.19
SCG3Q8WXD2 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SCG3Q8WXD2 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SCG3Q8WXD2 AL158211.3-201ENST00000607385 239 ntBASIC16.22■□□□□ 0.19
SCG3Q8WXD2 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
SCG3Q8WXD2 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.22■□□□□ 0.19
SCG3Q8WXD2 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
SCG3Q8WXD2 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.22■□□□□ 0.19
SCG3Q8WXD2 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SCG3Q8WXD2 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
SCG3Q8WXD2 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SCG3Q8WXD2 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
SCG3Q8WXD2 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SCG3Q8WXD2 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC16.22■□□□□ 0.19
SCG3Q8WXD2 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
SCG3Q8WXD2 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.21■□□□□ 0.19
SCG3Q8WXD2 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
SCG3Q8WXD2 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SCG3Q8WXD2 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SCG3Q8WXD2 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SCG3Q8WXD2 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SCG3Q8WXD2 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SCG3Q8WXD2 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SCG3Q8WXD2 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
SCG3Q8WXD2 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
SCG3Q8WXD2 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SCG3Q8WXD2 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SCG3Q8WXD2 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
SCG3Q8WXD2 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SCG3Q8WXD2 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SCG3Q8WXD2 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SCG3Q8WXD2 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
SCG3Q8WXD2 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SCG3Q8WXD2 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC16.21■□□□□ 0.19
SCG3Q8WXD2 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SCG3Q8WXD2 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SCG3Q8WXD2 AC098859.1-201ENST00000502915 1238 ntBASIC16.21■□□□□ 0.19
SCG3Q8WXD2 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SCG3Q8WXD2 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.21■□□□□ 0.19
SCG3Q8WXD2 AL138918.1-201ENST00000568306 659 ntBASIC16.21■□□□□ 0.19
SCG3Q8WXD2 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
SCG3Q8WXD2 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SCG3Q8WXD2 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
SCG3Q8WXD2 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SCG3Q8WXD2 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
SCG3Q8WXD2 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SCG3Q8WXD2 AC007326.2-201ENST00000624224 7579 ntBASIC16.21■□□□□ 0.19
SCG3Q8WXD2 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
SCG3Q8WXD2 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
SCG3Q8WXD2 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.21■□□□□ 0.19
SCG3Q8WXD2 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SCG3Q8WXD2 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
SCG3Q8WXD2 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC16.21■□□□□ 0.18
SCG3Q8WXD2 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
SCG3Q8WXD2 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.18
SCG3Q8WXD2 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
SCG3Q8WXD2 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
SCG3Q8WXD2 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SCG3Q8WXD2 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.2■□□□□ 0.18
SCG3Q8WXD2 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
SCG3Q8WXD2 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
SCG3Q8WXD2 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC16.2■□□□□ 0.18
SCG3Q8WXD2 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.2■□□□□ 0.18
SCG3Q8WXD2 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SCG3Q8WXD2 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
SCG3Q8WXD2 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SCG3Q8WXD2 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
SCG3Q8WXD2 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
SCG3Q8WXD2 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SCG3Q8WXD2 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.2■□□□□ 0.18
SCG3Q8WXD2 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.2■□□□□ 0.18
SCG3Q8WXD2 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SCG3Q8WXD2 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.2■□□□□ 0.18
SCG3Q8WXD2 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
SCG3Q8WXD2 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SCG3Q8WXD2 CALY-203ENST00000368558 825 ntTSL 5 BASIC16.2■□□□□ 0.18
SCG3Q8WXD2 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.2■□□□□ 0.18
SCG3Q8WXD2 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.2■□□□□ 0.18
SCG3Q8WXD2 TREML5P-201ENST00000421694 576 ntBASIC16.2■□□□□ 0.18
SCG3Q8WXD2 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.2■□□□□ 0.18
SCG3Q8WXD2 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.2■□□□□ 0.18
SCG3Q8WXD2 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.2■□□□□ 0.18
SCG3Q8WXD2 AL390955.2-201ENST00000603032 514 ntBASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms