Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
SLC44A1Q8WWI5 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
SLC44A1Q8WWI5 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC44A1Q8WWI5 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC44A1Q8WWI5 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
SLC44A1Q8WWI5 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC15.8■□□□□ 0.12
SLC44A1Q8WWI5 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC44A1Q8WWI5 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
SLC44A1Q8WWI5 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SLC44A1Q8WWI5 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.79■□□□□ 0.12
SLC44A1Q8WWI5 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SLC44A1Q8WWI5 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
SLC44A1Q8WWI5 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC44A1Q8WWI5 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
SLC44A1Q8WWI5 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC44A1Q8WWI5 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SLC44A1Q8WWI5 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC44A1Q8WWI5 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC44A1Q8WWI5 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SLC44A1Q8WWI5 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SLC44A1Q8WWI5 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC44A1Q8WWI5 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
SLC44A1Q8WWI5 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC44A1Q8WWI5 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC44A1Q8WWI5 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC44A1Q8WWI5 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC44A1Q8WWI5 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC44A1Q8WWI5 AL590627.1-203ENST00000421194 1026 ntBASIC15.79■□□□□ 0.12
SLC44A1Q8WWI5 ADH5P3-201ENST00000433842 1137 ntBASIC15.79■□□□□ 0.12
SLC44A1Q8WWI5 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SLC44A1Q8WWI5 RN7SL589P-201ENST00000481268 310 ntBASIC15.79■□□□□ 0.12
SLC44A1Q8WWI5 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SLC44A1Q8WWI5 LINC01225-203ENST00000563550 1244 ntBASIC15.79■□□□□ 0.12
SLC44A1Q8WWI5 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC15.79■□□□□ 0.12
SLC44A1Q8WWI5 AC120114.3-201ENST00000611923 658 ntBASIC15.79■□□□□ 0.12
SLC44A1Q8WWI5 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SLC44A1Q8WWI5 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.79■□□□□ 0.12
SLC44A1Q8WWI5 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC44A1Q8WWI5 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.79■□□□□ 0.12
SLC44A1Q8WWI5 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.79■□□□□ 0.12
SLC44A1Q8WWI5 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC44A1Q8WWI5 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SLC44A1Q8WWI5 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.79■□□□□ 0.12
SLC44A1Q8WWI5 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.79■□□□□ 0.12
SLC44A1Q8WWI5 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SLC44A1Q8WWI5 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC44A1Q8WWI5 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
SLC44A1Q8WWI5 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.79■□□□□ 0.12
SLC44A1Q8WWI5 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SLC44A1Q8WWI5 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.78■□□□□ 0.12
SLC44A1Q8WWI5 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC44A1Q8WWI5 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC44A1Q8WWI5 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC44A1Q8WWI5 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
SLC44A1Q8WWI5 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
SLC44A1Q8WWI5 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SLC44A1Q8WWI5 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC44A1Q8WWI5 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.78■□□□□ 0.12
SLC44A1Q8WWI5 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC44A1Q8WWI5 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC44A1Q8WWI5 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC44A1Q8WWI5 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC44A1Q8WWI5 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC44A1Q8WWI5 WASH3P-207ENST00000560956 1394 ntBASIC15.78■□□□□ 0.12
SLC44A1Q8WWI5 FO538757.1-201ENST00000623083 1397 ntBASIC15.78■□□□□ 0.12
SLC44A1Q8WWI5 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.78■□□□□ 0.12
SLC44A1Q8WWI5 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.78■□□□□ 0.12
SLC44A1Q8WWI5 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC44A1Q8WWI5 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC44A1Q8WWI5 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
SLC44A1Q8WWI5 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
SLC44A1Q8WWI5 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.78■□□□□ 0.12
SLC44A1Q8WWI5 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC44A1Q8WWI5 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC44A1Q8WWI5 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC44A1Q8WWI5 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC44A1Q8WWI5 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SLC44A1Q8WWI5 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC44A1Q8WWI5 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC44A1Q8WWI5 RPL5P21-201ENST00000404620 815 ntBASIC15.78■□□□□ 0.12
SLC44A1Q8WWI5 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
SLC44A1Q8WWI5 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SLC44A1Q8WWI5 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC15.78■□□□□ 0.12
SLC44A1Q8WWI5 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.78■□□□□ 0.12
SLC44A1Q8WWI5 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
SLC44A1Q8WWI5 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC15.78■□□□□ 0.12
SLC44A1Q8WWI5 NAA38-207ENST00000576861 556 ntTSL 3 BASIC15.78■□□□□ 0.12
SLC44A1Q8WWI5 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.78■□□□□ 0.12
SLC44A1Q8WWI5 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC15.78■□□□□ 0.12
SLC44A1Q8WWI5 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SLC44A1Q8WWI5 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC15.78■□□□□ 0.12
SLC44A1Q8WWI5 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
SLC44A1Q8WWI5 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC44A1Q8WWI5 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC44A1Q8WWI5 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SLC44A1Q8WWI5 AC005912.2-201ENST00000619492 2400 ntBASIC15.78■□□□□ 0.12
SLC44A1Q8WWI5 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SLC44A1Q8WWI5 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.78■□□□□ 0.12
SLC44A1Q8WWI5 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC44A1Q8WWI5 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms