Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SMIM4Q8WVI0 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
SMIM4Q8WVI0 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SMIM4Q8WVI0 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SMIM4Q8WVI0 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SMIM4Q8WVI0 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SMIM4Q8WVI0 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC13.49□□□□□ -0.25
SMIM4Q8WVI0 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SMIM4Q8WVI0 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SMIM4Q8WVI0 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SMIM4Q8WVI0 EMD-201ENST00000369835 966 ntTSL 3 BASIC13.49□□□□□ -0.25
SMIM4Q8WVI0 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC13.49□□□□□ -0.25
SMIM4Q8WVI0 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC13.49□□□□□ -0.25
SMIM4Q8WVI0 KRT18P34-201ENST00000488218 1270 ntBASIC13.49□□□□□ -0.25
SMIM4Q8WVI0 CFL1-202ENST00000524553 860 ntTSL 2 BASIC13.49□□□□□ -0.25
SMIM4Q8WVI0 RIN3-211ENST00000557762 517 ntTSL 3 BASIC13.49□□□□□ -0.25
SMIM4Q8WVI0 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC13.49□□□□□ -0.25
SMIM4Q8WVI0 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SMIM4Q8WVI0 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC13.49□□□□□ -0.25
SMIM4Q8WVI0 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
SMIM4Q8WVI0 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
SMIM4Q8WVI0 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC13.49□□□□□ -0.25
SMIM4Q8WVI0 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SMIM4Q8WVI0 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
SMIM4Q8WVI0 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SMIM4Q8WVI0 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SMIM4Q8WVI0 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SMIM4Q8WVI0 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SMIM4Q8WVI0 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC13.49□□□□□ -0.25
SMIM4Q8WVI0 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SMIM4Q8WVI0 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SMIM4Q8WVI0 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC13.49□□□□□ -0.25
SMIM4Q8WVI0 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.49□□□□□ -0.25
SMIM4Q8WVI0 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.49□□□□□ -0.25
SMIM4Q8WVI0 AC097359.2-201ENST00000604992 2389 ntBASIC13.49□□□□□ -0.25
SMIM4Q8WVI0 AC113367.3-201ENST00000508316 1912 ntBASIC13.49□□□□□ -0.25
SMIM4Q8WVI0 MED25-212ENST00000618715 1467 ntTSL 5 BASIC13.48□□□□□ -0.25
SMIM4Q8WVI0 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SMIM4Q8WVI0 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SMIM4Q8WVI0 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.48□□□□□ -0.25
SMIM4Q8WVI0 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
SMIM4Q8WVI0 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SMIM4Q8WVI0 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SMIM4Q8WVI0 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SMIM4Q8WVI0 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
SMIM4Q8WVI0 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SMIM4Q8WVI0 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SMIM4Q8WVI0 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC13.48□□□□□ -0.25
SMIM4Q8WVI0 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SMIM4Q8WVI0 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC13.48□□□□□ -0.25
SMIM4Q8WVI0 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SMIM4Q8WVI0 AL359881.3-201ENST00000602640 1721 ntBASIC13.48□□□□□ -0.25
SMIM4Q8WVI0 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC13.48□□□□□ -0.25
SMIM4Q8WVI0 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
SMIM4Q8WVI0 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
SMIM4Q8WVI0 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
SMIM4Q8WVI0 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
SMIM4Q8WVI0 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SMIM4Q8WVI0 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
SMIM4Q8WVI0 MTHFR-210ENST00000641407 2387 ntBASIC13.48□□□□□ -0.25
SMIM4Q8WVI0 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SMIM4Q8WVI0 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SMIM4Q8WVI0 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
SMIM4Q8WVI0 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SMIM4Q8WVI0 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SMIM4Q8WVI0 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
SMIM4Q8WVI0 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
SMIM4Q8WVI0 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC13.48□□□□□ -0.25
SMIM4Q8WVI0 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC13.48□□□□□ -0.25
SMIM4Q8WVI0 DUSP5P1-201ENST00000441325 1139 ntBASIC13.48□□□□□ -0.25
SMIM4Q8WVI0 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC13.48□□□□□ -0.25
SMIM4Q8WVI0 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SMIM4Q8WVI0 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC13.48□□□□□ -0.25
SMIM4Q8WVI0 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC13.48□□□□□ -0.25
SMIM4Q8WVI0 CYB561-216ENST00000582297 897 ntTSL 3 BASIC13.48□□□□□ -0.25
SMIM4Q8WVI0 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC13.48□□□□□ -0.25
SMIM4Q8WVI0 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SMIM4Q8WVI0 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC13.48□□□□□ -0.25
SMIM4Q8WVI0 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC13.48□□□□□ -0.25
SMIM4Q8WVI0 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SMIM4Q8WVI0 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SMIM4Q8WVI0 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
SMIM4Q8WVI0 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
SMIM4Q8WVI0 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
SMIM4Q8WVI0 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SMIM4Q8WVI0 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
SMIM4Q8WVI0 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.48□□□□□ -0.25
SMIM4Q8WVI0 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC13.48□□□□□ -0.25
SMIM4Q8WVI0 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
SMIM4Q8WVI0 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.48□□□□□ -0.25
SMIM4Q8WVI0 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
SMIM4Q8WVI0 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
SMIM4Q8WVI0 AL359183.1-201ENST00000623796 2132 ntBASIC13.48□□□□□ -0.25
SMIM4Q8WVI0 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SMIM4Q8WVI0 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SMIM4Q8WVI0 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.48□□□□□ -0.25
SMIM4Q8WVI0 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SMIM4Q8WVI0 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
SMIM4Q8WVI0 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SMIM4Q8WVI0 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms