Protein–RNA interactions for Protein: Q8TCU5

GRIN3A, Glutamate receptor ionotropic, NMDA 3A, humanhuman

Predictions only

Length 1,115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3AQ8TCU5 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
GRIN3AQ8TCU5 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
GRIN3AQ8TCU5 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.09■□□□□ 0.17
GRIN3AQ8TCU5 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
GRIN3AQ8TCU5 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
GRIN3AQ8TCU5 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
GRIN3AQ8TCU5 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
GRIN3AQ8TCU5 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
GRIN3AQ8TCU5 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
GRIN3AQ8TCU5 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
GRIN3AQ8TCU5 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.08■□□□□ 0.17
GRIN3AQ8TCU5 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.08■□□□□ 0.17
GRIN3AQ8TCU5 AC018892.3-201ENST00000623986 2499 ntBASIC16.08■□□□□ 0.17
GRIN3AQ8TCU5 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
GRIN3AQ8TCU5 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
GRIN3AQ8TCU5 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
GRIN3AQ8TCU5 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
GRIN3AQ8TCU5 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
GRIN3AQ8TCU5 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
GRIN3AQ8TCU5 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
GRIN3AQ8TCU5 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
GRIN3AQ8TCU5 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
GRIN3AQ8TCU5 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC16.08■□□□□ 0.16
GRIN3AQ8TCU5 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
GRIN3AQ8TCU5 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
GRIN3AQ8TCU5 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
GRIN3AQ8TCU5 LINC02447-202ENST00000501888 2146 ntBASIC16.08■□□□□ 0.16
GRIN3AQ8TCU5 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.08■□□□□ 0.16
GRIN3AQ8TCU5 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.08■□□□□ 0.16
GRIN3AQ8TCU5 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16.08■□□□□ 0.16
GRIN3AQ8TCU5 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
GRIN3AQ8TCU5 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
GRIN3AQ8TCU5 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.08■□□□□ 0.16
GRIN3AQ8TCU5 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
GRIN3AQ8TCU5 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
GRIN3AQ8TCU5 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
GRIN3AQ8TCU5 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
GRIN3AQ8TCU5 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
GRIN3AQ8TCU5 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
GRIN3AQ8TCU5 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
GRIN3AQ8TCU5 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
GRIN3AQ8TCU5 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
GRIN3AQ8TCU5 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
GRIN3AQ8TCU5 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
GRIN3AQ8TCU5 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
GRIN3AQ8TCU5 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.08■□□□□ 0.16
GRIN3AQ8TCU5 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
GRIN3AQ8TCU5 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
GRIN3AQ8TCU5 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
GRIN3AQ8TCU5 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
GRIN3AQ8TCU5 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
GRIN3AQ8TCU5 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.08■□□□□ 0.16
GRIN3AQ8TCU5 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
GRIN3AQ8TCU5 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.07■□□□□ 0.16
GRIN3AQ8TCU5 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
GRIN3AQ8TCU5 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
GRIN3AQ8TCU5 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
GRIN3AQ8TCU5 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
GRIN3AQ8TCU5 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
GRIN3AQ8TCU5 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.07■□□□□ 0.16
GRIN3AQ8TCU5 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
GRIN3AQ8TCU5 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
GRIN3AQ8TCU5 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
GRIN3AQ8TCU5 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.07■□□□□ 0.16
GRIN3AQ8TCU5 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
GRIN3AQ8TCU5 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
GRIN3AQ8TCU5 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
GRIN3AQ8TCU5 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
GRIN3AQ8TCU5 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
GRIN3AQ8TCU5 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
GRIN3AQ8TCU5 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.07■□□□□ 0.16
GRIN3AQ8TCU5 EDF1-203ENST00000371649 790 ntTSL 2 BASIC16.07■□□□□ 0.16
GRIN3AQ8TCU5 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
GRIN3AQ8TCU5 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
GRIN3AQ8TCU5 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
GRIN3AQ8TCU5 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.07■□□□□ 0.16
GRIN3AQ8TCU5 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.07■□□□□ 0.16
GRIN3AQ8TCU5 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC16.07■□□□□ 0.16
GRIN3AQ8TCU5 AP005018.1-201ENST00000525475 301 ntBASIC16.07■□□□□ 0.16
GRIN3AQ8TCU5 TPRX2P-201ENST00000535362 881 ntBASIC16.07■□□□□ 0.16
GRIN3AQ8TCU5 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.07■□□□□ 0.16
GRIN3AQ8TCU5 SPDYE22P-201ENST00000582158 798 ntBASIC16.07■□□□□ 0.16
GRIN3AQ8TCU5 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.07■□□□□ 0.16
GRIN3AQ8TCU5 LINC01115-203ENST00000606068 577 ntBASIC16.07■□□□□ 0.16
GRIN3AQ8TCU5 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
GRIN3AQ8TCU5 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
GRIN3AQ8TCU5 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
GRIN3AQ8TCU5 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
GRIN3AQ8TCU5 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.07■□□□□ 0.16
GRIN3AQ8TCU5 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
GRIN3AQ8TCU5 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.07■□□□□ 0.16
GRIN3AQ8TCU5 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.07■□□□□ 0.16
GRIN3AQ8TCU5 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
GRIN3AQ8TCU5 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
GRIN3AQ8TCU5 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
GRIN3AQ8TCU5 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
GRIN3AQ8TCU5 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
GRIN3AQ8TCU5 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
GRIN3AQ8TCU5 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
GRIN3AQ8TCU5 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms