Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
UBA3Q8TBC4 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBA3Q8TBC4 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
UBA3Q8TBC4 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
UBA3Q8TBC4 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBA3Q8TBC4 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
UBA3Q8TBC4 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBA3Q8TBC4 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
UBA3Q8TBC4 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
UBA3Q8TBC4 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.66■□□□□ 0.26
UBA3Q8TBC4 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBA3Q8TBC4 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
UBA3Q8TBC4 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.66■□□□□ 0.26
UBA3Q8TBC4 SERBP1P5-201ENST00000510079 1181 ntBASIC16.66■□□□□ 0.26
UBA3Q8TBC4 SLED1-202ENST00000512051 380 ntBASIC16.66■□□□□ 0.26
UBA3Q8TBC4 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
UBA3Q8TBC4 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
UBA3Q8TBC4 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.66■□□□□ 0.26
UBA3Q8TBC4 TIMM17BP1-201ENST00000545713 516 ntBASIC16.66■□□□□ 0.26
UBA3Q8TBC4 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
UBA3Q8TBC4 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC16.66■□□□□ 0.26
UBA3Q8TBC4 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
UBA3Q8TBC4 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16.66■□□□□ 0.26
UBA3Q8TBC4 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.66■□□□□ 0.26
UBA3Q8TBC4 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBA3Q8TBC4 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBA3Q8TBC4 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBA3Q8TBC4 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
UBA3Q8TBC4 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
UBA3Q8TBC4 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
UBA3Q8TBC4 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
UBA3Q8TBC4 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
UBA3Q8TBC4 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.66■□□□□ 0.26
UBA3Q8TBC4 AC136621.1-201ENST00000624017 2304 ntBASIC16.65■□□□□ 0.26
UBA3Q8TBC4 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
UBA3Q8TBC4 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
UBA3Q8TBC4 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
UBA3Q8TBC4 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
UBA3Q8TBC4 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBA3Q8TBC4 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
UBA3Q8TBC4 AC046158.3-201ENST00000624947 2558 ntBASIC16.65■□□□□ 0.26
UBA3Q8TBC4 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
UBA3Q8TBC4 AC090616.6-203ENST00000579186 1945 ntBASIC16.65■□□□□ 0.26
UBA3Q8TBC4 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.65■□□□□ 0.26
UBA3Q8TBC4 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.65■□□□□ 0.26
UBA3Q8TBC4 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBA3Q8TBC4 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBA3Q8TBC4 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.65■□□□□ 0.26
UBA3Q8TBC4 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBA3Q8TBC4 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
UBA3Q8TBC4 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBA3Q8TBC4 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.65■□□□□ 0.26
UBA3Q8TBC4 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC16.65■□□□□ 0.26
UBA3Q8TBC4 AC015922.1-201ENST00000421102 1152 ntBASIC16.65■□□□□ 0.26
UBA3Q8TBC4 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
UBA3Q8TBC4 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.65■□□□□ 0.26
UBA3Q8TBC4 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.65■□□□□ 0.26
UBA3Q8TBC4 RN7SL204P-201ENST00000582831 262 ntBASIC16.65■□□□□ 0.26
UBA3Q8TBC4 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBA3Q8TBC4 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
UBA3Q8TBC4 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
UBA3Q8TBC4 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
UBA3Q8TBC4 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
UBA3Q8TBC4 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.65■□□□□ 0.26
UBA3Q8TBC4 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBA3Q8TBC4 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
UBA3Q8TBC4 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
UBA3Q8TBC4 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.65■□□□□ 0.26
UBA3Q8TBC4 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBA3Q8TBC4 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
UBA3Q8TBC4 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
UBA3Q8TBC4 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.65■□□□□ 0.26
UBA3Q8TBC4 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBA3Q8TBC4 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.65■□□□□ 0.26
UBA3Q8TBC4 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBA3Q8TBC4 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBA3Q8TBC4 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
UBA3Q8TBC4 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
UBA3Q8TBC4 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBA3Q8TBC4 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBA3Q8TBC4 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBA3Q8TBC4 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
UBA3Q8TBC4 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.64■□□□□ 0.26
UBA3Q8TBC4 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.64■□□□□ 0.26
UBA3Q8TBC4 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
UBA3Q8TBC4 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.64■□□□□ 0.26
UBA3Q8TBC4 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBA3Q8TBC4 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
UBA3Q8TBC4 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.64■□□□□ 0.25
UBA3Q8TBC4 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
UBA3Q8TBC4 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBA3Q8TBC4 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBA3Q8TBC4 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
UBA3Q8TBC4 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
UBA3Q8TBC4 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBA3Q8TBC4 SPDYE19P-201ENST00000338590 713 ntBASIC16.64■□□□□ 0.25
UBA3Q8TBC4 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBA3Q8TBC4 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBA3Q8TBC4 AC236430.1-201ENST00000402231 743 ntBASIC16.64■□□□□ 0.25
UBA3Q8TBC4 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms