Protein–RNA interactions for Protein: Q8TAT5

NEIL3, Endonuclease 8-like 3, humanhuman

Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL3Q8TAT5 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NEIL3Q8TAT5 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NEIL3Q8TAT5 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NEIL3Q8TAT5 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.69□□□□□ -0.06
NEIL3Q8TAT5 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NEIL3Q8TAT5 REXO1L8P-201ENST00000604378 1897 ntBASIC14.69□□□□□ -0.06
NEIL3Q8TAT5 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
NEIL3Q8TAT5 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.69□□□□□ -0.06
NEIL3Q8TAT5 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NEIL3Q8TAT5 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NEIL3Q8TAT5 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NEIL3Q8TAT5 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.69□□□□□ -0.06
NEIL3Q8TAT5 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
NEIL3Q8TAT5 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.69□□□□□ -0.06
NEIL3Q8TAT5 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.69□□□□□ -0.06
NEIL3Q8TAT5 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.69□□□□□ -0.06
NEIL3Q8TAT5 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.69□□□□□ -0.06
NEIL3Q8TAT5 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
NEIL3Q8TAT5 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.69□□□□□ -0.06
NEIL3Q8TAT5 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NEIL3Q8TAT5 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.69□□□□□ -0.06
NEIL3Q8TAT5 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.69□□□□□ -0.06
NEIL3Q8TAT5 AC004890.2-204ENST00000481968 304 ntBASIC14.69□□□□□ -0.06
NEIL3Q8TAT5 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.69□□□□□ -0.06
NEIL3Q8TAT5 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.69□□□□□ -0.06
NEIL3Q8TAT5 BANF1P1-201ENST00000553684 263 ntBASIC14.69□□□□□ -0.06
NEIL3Q8TAT5 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.69□□□□□ -0.06
NEIL3Q8TAT5 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.69□□□□□ -0.06
NEIL3Q8TAT5 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
NEIL3Q8TAT5 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.69□□□□□ -0.06
NEIL3Q8TAT5 AC026979.3-201ENST00000607315 403 ntBASIC14.69□□□□□ -0.06
NEIL3Q8TAT5 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
NEIL3Q8TAT5 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NEIL3Q8TAT5 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
NEIL3Q8TAT5 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.69□□□□□ -0.06
NEIL3Q8TAT5 AL161772.1-201ENST00000610494 4412 ntBASIC14.69□□□□□ -0.06
NEIL3Q8TAT5 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
NEIL3Q8TAT5 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NEIL3Q8TAT5 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NEIL3Q8TAT5 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NEIL3Q8TAT5 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.69□□□□□ -0.06
NEIL3Q8TAT5 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
NEIL3Q8TAT5 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
NEIL3Q8TAT5 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NEIL3Q8TAT5 U82695.1-201ENST00000635752 1889 ntBASIC14.69□□□□□ -0.06
NEIL3Q8TAT5 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
NEIL3Q8TAT5 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NEIL3Q8TAT5 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
NEIL3Q8TAT5 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
NEIL3Q8TAT5 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.69□□□□□ -0.06
NEIL3Q8TAT5 AC005622.1-201ENST00000636801 1703 ntBASIC14.69□□□□□ -0.06
NEIL3Q8TAT5 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.69□□□□□ -0.06
NEIL3Q8TAT5 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
NEIL3Q8TAT5 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NEIL3Q8TAT5 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
NEIL3Q8TAT5 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NEIL3Q8TAT5 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NEIL3Q8TAT5 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NEIL3Q8TAT5 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
NEIL3Q8TAT5 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NEIL3Q8TAT5 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.68□□□□□ -0.06
NEIL3Q8TAT5 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NEIL3Q8TAT5 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
NEIL3Q8TAT5 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NEIL3Q8TAT5 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NEIL3Q8TAT5 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NEIL3Q8TAT5 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.68□□□□□ -0.06
NEIL3Q8TAT5 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.68□□□□□ -0.06
NEIL3Q8TAT5 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
NEIL3Q8TAT5 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NEIL3Q8TAT5 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NEIL3Q8TAT5 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.68□□□□□ -0.06
NEIL3Q8TAT5 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NEIL3Q8TAT5 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
NEIL3Q8TAT5 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NEIL3Q8TAT5 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NEIL3Q8TAT5 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.68□□□□□ -0.06
NEIL3Q8TAT5 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.68□□□□□ -0.06
NEIL3Q8TAT5 TSSK5P-201ENST00000423978 907 ntBASIC14.68□□□□□ -0.06
NEIL3Q8TAT5 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
NEIL3Q8TAT5 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NEIL3Q8TAT5 FAM207CP-201ENST00000443486 507 ntBASIC14.68□□□□□ -0.06
NEIL3Q8TAT5 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.68□□□□□ -0.06
NEIL3Q8TAT5 UGT1A2P-201ENST00000454886 866 ntBASIC14.68□□□□□ -0.06
NEIL3Q8TAT5 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.68□□□□□ -0.06
NEIL3Q8TAT5 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
NEIL3Q8TAT5 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
NEIL3Q8TAT5 LHX6-205ENST00000464484 666 ntTSL 2 BASIC14.68□□□□□ -0.06
NEIL3Q8TAT5 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.68□□□□□ -0.06
NEIL3Q8TAT5 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.68□□□□□ -0.06
NEIL3Q8TAT5 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
NEIL3Q8TAT5 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.68□□□□□ -0.06
NEIL3Q8TAT5 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.68□□□□□ -0.06
NEIL3Q8TAT5 AC138761.1-201ENST00000584393 385 ntBASIC14.68□□□□□ -0.06
NEIL3Q8TAT5 AL133215.2-201ENST00000609242 977 ntBASIC14.68□□□□□ -0.06
NEIL3Q8TAT5 AC023157.3-201ENST00000619086 2088 ntBASIC14.68□□□□□ -0.06
NEIL3Q8TAT5 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
NEIL3Q8TAT5 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NEIL3Q8TAT5 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.68□□□□□ -0.06
NEIL3Q8TAT5 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms