Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
COL22A1Q8NFW1 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
COL22A1Q8NFW1 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
COL22A1Q8NFW1 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
COL22A1Q8NFW1 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
COL22A1Q8NFW1 AC090502.4-201ENST00000551714 1386 ntBASIC20.36■□□□□ 0.85
COL22A1Q8NFW1 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC20.36■□□□□ 0.85
COL22A1Q8NFW1 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COL22A1Q8NFW1 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COL22A1Q8NFW1 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC20.35■□□□□ 0.85
COL22A1Q8NFW1 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
COL22A1Q8NFW1 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
COL22A1Q8NFW1 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
COL22A1Q8NFW1 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COL22A1Q8NFW1 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC20.35■□□□□ 0.85
COL22A1Q8NFW1 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
COL22A1Q8NFW1 AP000358.1-201ENST00000456260 156 ntBASIC20.35■□□□□ 0.85
COL22A1Q8NFW1 CHCHD2P9-201ENST00000461726 456 ntBASIC20.35■□□□□ 0.85
COL22A1Q8NFW1 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC20.35■□□□□ 0.85
COL22A1Q8NFW1 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC20.35■□□□□ 0.85
COL22A1Q8NFW1 AL118516.1-201ENST00000564152 670 ntBASIC20.35■□□□□ 0.85
COL22A1Q8NFW1 MIR5196-201ENST00000578146 115 ntBASIC20.35■□□□□ 0.85
COL22A1Q8NFW1 NAT9-220ENST00000582870 896 ntTSL 5 BASIC20.35■□□□□ 0.85
COL22A1Q8NFW1 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
COL22A1Q8NFW1 FO393412.1-201ENST00000619841 382 ntBASIC20.35■□□□□ 0.85
COL22A1Q8NFW1 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COL22A1Q8NFW1 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COL22A1Q8NFW1 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC20.35■□□□□ 0.85
COL22A1Q8NFW1 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
COL22A1Q8NFW1 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
COL22A1Q8NFW1 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
COL22A1Q8NFW1 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC20.35■□□□□ 0.85
COL22A1Q8NFW1 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
COL22A1Q8NFW1 AC011840.2-201ENST00000563063 1520 ntBASIC20.35■□□□□ 0.85
COL22A1Q8NFW1 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COL22A1Q8NFW1 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COL22A1Q8NFW1 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
COL22A1Q8NFW1 FRMPD2B-201ENST00000431305 1347 ntBASIC20.35■□□□□ 0.85
COL22A1Q8NFW1 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
COL22A1Q8NFW1 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
COL22A1Q8NFW1 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
COL22A1Q8NFW1 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC20.35■□□□□ 0.85
COL22A1Q8NFW1 ALOX12P2-203ENST00000570921 1945 ntBASIC20.35■□□□□ 0.85
COL22A1Q8NFW1 LYPLA2P1-203ENST00000447689 696 ntBASIC20.35■□□□□ 0.85
COL22A1Q8NFW1 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC20.35■□□□□ 0.85
COL22A1Q8NFW1 RN7SL596P-201ENST00000582123 288 ntBASIC20.35■□□□□ 0.85
COL22A1Q8NFW1 MIR4522-201ENST00000584932 87 ntBASIC20.35■□□□□ 0.85
COL22A1Q8NFW1 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC20.35■□□□□ 0.85
COL22A1Q8NFW1 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC20.35■□□□□ 0.85
COL22A1Q8NFW1 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
COL22A1Q8NFW1 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC20.34■□□□□ 0.85
COL22A1Q8NFW1 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL22A1Q8NFW1 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL22A1Q8NFW1 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC20.34■□□□□ 0.85
COL22A1Q8NFW1 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC20.34■□□□□ 0.85
COL22A1Q8NFW1 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC20.34■□□□□ 0.85
COL22A1Q8NFW1 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC20.34■□□□□ 0.85
COL22A1Q8NFW1 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL22A1Q8NFW1 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
COL22A1Q8NFW1 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC20.34■□□□□ 0.85
COL22A1Q8NFW1 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
COL22A1Q8NFW1 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL22A1Q8NFW1 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
COL22A1Q8NFW1 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC20.34■□□□□ 0.85
COL22A1Q8NFW1 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
COL22A1Q8NFW1 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC20.34■□□□□ 0.85
COL22A1Q8NFW1 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
COL22A1Q8NFW1 REEP5-205ENST00000504247 480 ntTSL 5 BASIC20.34■□□□□ 0.85
COL22A1Q8NFW1 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC20.34■□□□□ 0.85
COL22A1Q8NFW1 ALG1L13P-202ENST00000519320 584 ntBASIC20.34■□□□□ 0.85
COL22A1Q8NFW1 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL22A1Q8NFW1 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC20.34■□□□□ 0.85
COL22A1Q8NFW1 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC20.34■□□□□ 0.85
COL22A1Q8NFW1 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC20.34■□□□□ 0.85
COL22A1Q8NFW1 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC20.34■□□□□ 0.85
COL22A1Q8NFW1 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC20.34■□□□□ 0.85
COL22A1Q8NFW1 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL22A1Q8NFW1 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
COL22A1Q8NFW1 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
COL22A1Q8NFW1 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC20.34■□□□□ 0.85
COL22A1Q8NFW1 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC20.34■□□□□ 0.85
COL22A1Q8NFW1 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
COL22A1Q8NFW1 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
COL22A1Q8NFW1 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC20.33■□□□□ 0.85
COL22A1Q8NFW1 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
COL22A1Q8NFW1 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC20.33■□□□□ 0.85
COL22A1Q8NFW1 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
COL22A1Q8NFW1 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
COL22A1Q8NFW1 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
COL22A1Q8NFW1 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
COL22A1Q8NFW1 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
COL22A1Q8NFW1 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
COL22A1Q8NFW1 RN7SL81P-201ENST00000493781 261 ntBASIC20.33■□□□□ 0.84
COL22A1Q8NFW1 ORAOV1P1-201ENST00000503108 395 ntBASIC20.33■□□□□ 0.84
COL22A1Q8NFW1 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
COL22A1Q8NFW1 AC084781.1-201ENST00000613737 656 ntBASIC20.33■□□□□ 0.84
COL22A1Q8NFW1 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC20.33■□□□□ 0.84
COL22A1Q8NFW1 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
COL22A1Q8NFW1 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
COL22A1Q8NFW1 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms