Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NUP43Q8NFH3 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NUP43Q8NFH3 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.76□□□□□ -0.05
NUP43Q8NFH3 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NUP43Q8NFH3 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
NUP43Q8NFH3 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NUP43Q8NFH3 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
NUP43Q8NFH3 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NUP43Q8NFH3 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
NUP43Q8NFH3 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
NUP43Q8NFH3 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
NUP43Q8NFH3 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
NUP43Q8NFH3 TUBB3P1-201ENST00000405796 1332 ntBASIC14.75□□□□□ -0.05
NUP43Q8NFH3 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
NUP43Q8NFH3 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
NUP43Q8NFH3 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
NUP43Q8NFH3 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NUP43Q8NFH3 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
NUP43Q8NFH3 CNN2P2-201ENST00000443536 909 ntBASIC14.75□□□□□ -0.05
NUP43Q8NFH3 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.75□□□□□ -0.05
NUP43Q8NFH3 CNN2P3-201ENST00000450201 906 ntBASIC14.75□□□□□ -0.05
NUP43Q8NFH3 SERBP1P3-201ENST00000459980 809 ntBASIC14.75□□□□□ -0.05
NUP43Q8NFH3 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.75□□□□□ -0.05
NUP43Q8NFH3 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.75□□□□□ -0.05
NUP43Q8NFH3 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC14.75□□□□□ -0.05
NUP43Q8NFH3 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.75□□□□□ -0.05
NUP43Q8NFH3 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
NUP43Q8NFH3 AC025678.2-201ENST00000562061 970 ntBASIC14.75□□□□□ -0.05
NUP43Q8NFH3 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.75□□□□□ -0.05
NUP43Q8NFH3 AL136317.3-201ENST00000618497 906 ntBASIC14.75□□□□□ -0.05
NUP43Q8NFH3 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.75□□□□□ -0.05
NUP43Q8NFH3 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
NUP43Q8NFH3 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.75□□□□□ -0.05
NUP43Q8NFH3 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
NUP43Q8NFH3 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
NUP43Q8NFH3 AC126755.1-201ENST00000525846 6405 ntBASIC14.75□□□□□ -0.05
NUP43Q8NFH3 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.75□□□□□ -0.05
NUP43Q8NFH3 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NUP43Q8NFH3 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.75□□□□□ -0.05
NUP43Q8NFH3 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
NUP43Q8NFH3 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
NUP43Q8NFH3 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.75□□□□□ -0.05
NUP43Q8NFH3 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.75□□□□□ -0.05
NUP43Q8NFH3 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NUP43Q8NFH3 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.74□□□□□ -0.05
NUP43Q8NFH3 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.74□□□□□ -0.05
NUP43Q8NFH3 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
NUP43Q8NFH3 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NUP43Q8NFH3 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NUP43Q8NFH3 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
NUP43Q8NFH3 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NUP43Q8NFH3 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
NUP43Q8NFH3 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.74□□□□□ -0.05
NUP43Q8NFH3 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NUP43Q8NFH3 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NUP43Q8NFH3 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NUP43Q8NFH3 AL109954.1-202ENST00000564051 2148 ntBASIC14.74□□□□□ -0.05
NUP43Q8NFH3 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
NUP43Q8NFH3 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NUP43Q8NFH3 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NUP43Q8NFH3 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NUP43Q8NFH3 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NUP43Q8NFH3 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NUP43Q8NFH3 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
NUP43Q8NFH3 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NUP43Q8NFH3 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NUP43Q8NFH3 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NUP43Q8NFH3 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
NUP43Q8NFH3 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NUP43Q8NFH3 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NUP43Q8NFH3 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
NUP43Q8NFH3 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NUP43Q8NFH3 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
NUP43Q8NFH3 AL080243.2-201ENST00000418783 582 ntBASIC14.74□□□□□ -0.05
NUP43Q8NFH3 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.74□□□□□ -0.05
NUP43Q8NFH3 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC14.74□□□□□ -0.05
NUP43Q8NFH3 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.74□□□□□ -0.05
NUP43Q8NFH3 TARDBPP1-201ENST00000442013 1203 ntBASIC14.74□□□□□ -0.05
NUP43Q8NFH3 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.74□□□□□ -0.05
NUP43Q8NFH3 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.74□□□□□ -0.05
NUP43Q8NFH3 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC14.74□□□□□ -0.05
NUP43Q8NFH3 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.74□□□□□ -0.05
NUP43Q8NFH3 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.74□□□□□ -0.05
NUP43Q8NFH3 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
NUP43Q8NFH3 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14.74□□□□□ -0.05
NUP43Q8NFH3 AP001160.2-201ENST00000596071 487 ntBASIC14.74□□□□□ -0.05
NUP43Q8NFH3 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.74□□□□□ -0.05
NUP43Q8NFH3 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
NUP43Q8NFH3 AC138035.3-201ENST00000622706 2791 ntBASIC14.74□□□□□ -0.05
NUP43Q8NFH3 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NUP43Q8NFH3 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NUP43Q8NFH3 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NUP43Q8NFH3 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.74□□□□□ -0.05
NUP43Q8NFH3 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NUP43Q8NFH3 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.74□□□□□ -0.05
NUP43Q8NFH3 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NUP43Q8NFH3 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.74□□□□□ -0.05
NUP43Q8NFH3 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NUP43Q8NFH3 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NUP43Q8NFH3 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms