Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRAM1L1Q8N609 AC092850.2-201ENST00000623821 2697 ntBASIC15.51■□□□□ 0.07
TRAM1L1Q8N609 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAM1L1Q8N609 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRAM1L1Q8N609 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.5■□□□□ 0.07
TRAM1L1Q8N609 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.5■□□□□ 0.07
TRAM1L1Q8N609 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAM1L1Q8N609 AC020658.6-201ENST00000623564 1870 ntBASIC15.5■□□□□ 0.07
TRAM1L1Q8N609 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAM1L1Q8N609 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.5■□□□□ 0.07
TRAM1L1Q8N609 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAM1L1Q8N609 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAM1L1Q8N609 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
TRAM1L1Q8N609 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAM1L1Q8N609 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.5■□□□□ 0.07
TRAM1L1Q8N609 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRAM1L1Q8N609 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAM1L1Q8N609 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAM1L1Q8N609 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC15.5■□□□□ 0.07
TRAM1L1Q8N609 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAM1L1Q8N609 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC15.5■□□□□ 0.07
TRAM1L1Q8N609 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAM1L1Q8N609 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAM1L1Q8N609 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAM1L1Q8N609 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC15.5■□□□□ 0.07
TRAM1L1Q8N609 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC15.5■□□□□ 0.07
TRAM1L1Q8N609 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
TRAM1L1Q8N609 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC15.5■□□□□ 0.07
TRAM1L1Q8N609 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC15.5■□□□□ 0.07
TRAM1L1Q8N609 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC15.5■□□□□ 0.07
TRAM1L1Q8N609 AC027307.3-201ENST00000594262 1100 ntBASIC15.5■□□□□ 0.07
TRAM1L1Q8N609 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC15.5■□□□□ 0.07
TRAM1L1Q8N609 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
TRAM1L1Q8N609 AC007431.3-201ENST00000623221 587 ntBASIC15.5■□□□□ 0.07
TRAM1L1Q8N609 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.5■□□□□ 0.07
TRAM1L1Q8N609 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC15.5■□□□□ 0.07
TRAM1L1Q8N609 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
TRAM1L1Q8N609 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRAM1L1Q8N609 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAM1L1Q8N609 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAM1L1Q8N609 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAM1L1Q8N609 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAM1L1Q8N609 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.5■□□□□ 0.07
TRAM1L1Q8N609 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.5■□□□□ 0.07
TRAM1L1Q8N609 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAM1L1Q8N609 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRAM1L1Q8N609 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAM1L1Q8N609 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC15.5■□□□□ 0.07
TRAM1L1Q8N609 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAM1L1Q8N609 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAM1L1Q8N609 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRAM1L1Q8N609 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.49■□□□□ 0.07
TRAM1L1Q8N609 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAM1L1Q8N609 AC090616.6-203ENST00000579186 1945 ntBASIC15.49■□□□□ 0.07
TRAM1L1Q8N609 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
TRAM1L1Q8N609 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAM1L1Q8N609 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAM1L1Q8N609 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.49■□□□□ 0.07
TRAM1L1Q8N609 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
TRAM1L1Q8N609 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAM1L1Q8N609 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
TRAM1L1Q8N609 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
TRAM1L1Q8N609 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAM1L1Q8N609 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC15.49■□□□□ 0.07
TRAM1L1Q8N609 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.49■□□□□ 0.07
TRAM1L1Q8N609 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRAM1L1Q8N609 MYCLP2-201ENST00000449268 967 ntBASIC15.49■□□□□ 0.07
TRAM1L1Q8N609 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC15.49■□□□□ 0.07
TRAM1L1Q8N609 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC15.49■□□□□ 0.07
TRAM1L1Q8N609 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRAM1L1Q8N609 TBCB-211ENST00000589996 724 ntTSL 3 BASIC15.49■□□□□ 0.07
TRAM1L1Q8N609 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC15.49■□□□□ 0.07
TRAM1L1Q8N609 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.49■□□□□ 0.07
TRAM1L1Q8N609 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.49■□□□□ 0.07
TRAM1L1Q8N609 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAM1L1Q8N609 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
TRAM1L1Q8N609 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRAM1L1Q8N609 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAM1L1Q8N609 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRAM1L1Q8N609 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAM1L1Q8N609 AC008741.2-201ENST00000612792 3115 ntBASIC15.49■□□□□ 0.07
TRAM1L1Q8N609 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.49■□□□□ 0.07
TRAM1L1Q8N609 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.49■□□□□ 0.07
TRAM1L1Q8N609 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAM1L1Q8N609 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAM1L1Q8N609 AC084364.1-201ENST00000551967 1556 ntBASIC15.49■□□□□ 0.07
TRAM1L1Q8N609 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.49■□□□□ 0.07
TRAM1L1Q8N609 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.49■□□□□ 0.07
TRAM1L1Q8N609 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.48■□□□□ 0.07
TRAM1L1Q8N609 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRAM1L1Q8N609 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAM1L1Q8N609 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRAM1L1Q8N609 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAM1L1Q8N609 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.48■□□□□ 0.07
TRAM1L1Q8N609 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAM1L1Q8N609 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
TRAM1L1Q8N609 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.48■□□□□ 0.07
TRAM1L1Q8N609 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.48■□□□□ 0.07
TRAM1L1Q8N609 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAM1L1Q8N609 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms