Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ATPAF2Q8N5M1 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATPAF2Q8N5M1 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.15■□□□□ 0.18
ATPAF2Q8N5M1 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.15■□□□□ 0.18
ATPAF2Q8N5M1 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
ATPAF2Q8N5M1 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
ATPAF2Q8N5M1 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ATPAF2Q8N5M1 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ATPAF2Q8N5M1 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.14■□□□□ 0.17
ATPAF2Q8N5M1 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATPAF2Q8N5M1 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATPAF2Q8N5M1 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ATPAF2Q8N5M1 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.14■□□□□ 0.17
ATPAF2Q8N5M1 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.14■□□□□ 0.17
ATPAF2Q8N5M1 AL162727.3-201ENST00000635661 2787 ntBASIC16.14■□□□□ 0.17
ATPAF2Q8N5M1 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATPAF2Q8N5M1 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.14■□□□□ 0.17
ATPAF2Q8N5M1 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.14■□□□□ 0.17
ATPAF2Q8N5M1 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.14■□□□□ 0.17
ATPAF2Q8N5M1 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.14■□□□□ 0.17
ATPAF2Q8N5M1 AC074338.1-201ENST00000416825 156 ntBASIC16.14■□□□□ 0.17
ATPAF2Q8N5M1 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.14■□□□□ 0.17
ATPAF2Q8N5M1 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.14■□□□□ 0.17
ATPAF2Q8N5M1 TSSK5P-201ENST00000423978 907 ntBASIC16.14■□□□□ 0.17
ATPAF2Q8N5M1 BASP1P1-201ENST00000430708 665 ntBASIC16.14■□□□□ 0.17
ATPAF2Q8N5M1 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.14■□□□□ 0.17
ATPAF2Q8N5M1 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ATPAF2Q8N5M1 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.14■□□□□ 0.17
ATPAF2Q8N5M1 ZNF890P-202ENST00000530367 1156 ntBASIC16.14■□□□□ 0.17
ATPAF2Q8N5M1 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATPAF2Q8N5M1 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.14■□□□□ 0.17
ATPAF2Q8N5M1 AC044860.1-202ENST00000559481 777 ntBASIC16.14■□□□□ 0.17
ATPAF2Q8N5M1 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.14■□□□□ 0.17
ATPAF2Q8N5M1 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.14■□□□□ 0.17
ATPAF2Q8N5M1 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.14■□□□□ 0.17
ATPAF2Q8N5M1 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.14■□□□□ 0.17
ATPAF2Q8N5M1 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
ATPAF2Q8N5M1 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.14■□□□□ 0.17
ATPAF2Q8N5M1 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.14■□□□□ 0.17
ATPAF2Q8N5M1 AL390955.2-201ENST00000603032 514 ntBASIC16.14■□□□□ 0.17
ATPAF2Q8N5M1 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.14■□□□□ 0.17
ATPAF2Q8N5M1 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.14■□□□□ 0.17
ATPAF2Q8N5M1 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.14■□□□□ 0.17
ATPAF2Q8N5M1 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.14■□□□□ 0.17
ATPAF2Q8N5M1 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATPAF2Q8N5M1 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATPAF2Q8N5M1 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.14■□□□□ 0.17
ATPAF2Q8N5M1 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ATPAF2Q8N5M1 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATPAF2Q8N5M1 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATPAF2Q8N5M1 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
ATPAF2Q8N5M1 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATPAF2Q8N5M1 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATPAF2Q8N5M1 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATPAF2Q8N5M1 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATPAF2Q8N5M1 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
ATPAF2Q8N5M1 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATPAF2Q8N5M1 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.14■□□□□ 0.17
ATPAF2Q8N5M1 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATPAF2Q8N5M1 AC090616.6-203ENST00000579186 1945 ntBASIC16.13■□□□□ 0.17
ATPAF2Q8N5M1 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
ATPAF2Q8N5M1 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.13■□□□□ 0.17
ATPAF2Q8N5M1 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.13■□□□□ 0.17
ATPAF2Q8N5M1 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATPAF2Q8N5M1 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ATPAF2Q8N5M1 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.13■□□□□ 0.17
ATPAF2Q8N5M1 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ATPAF2Q8N5M1 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
ATPAF2Q8N5M1 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
ATPAF2Q8N5M1 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATPAF2Q8N5M1 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
ATPAF2Q8N5M1 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC16.13■□□□□ 0.17
ATPAF2Q8N5M1 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATPAF2Q8N5M1 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATPAF2Q8N5M1 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATPAF2Q8N5M1 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATPAF2Q8N5M1 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ATPAF2Q8N5M1 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.13■□□□□ 0.17
ATPAF2Q8N5M1 AL512638.1-201ENST00000457493 794 ntBASIC16.13■□□□□ 0.17
ATPAF2Q8N5M1 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.13■□□□□ 0.17
ATPAF2Q8N5M1 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.13■□□□□ 0.17
ATPAF2Q8N5M1 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.13■□□□□ 0.17
ATPAF2Q8N5M1 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.13■□□□□ 0.17
ATPAF2Q8N5M1 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.13■□□□□ 0.17
ATPAF2Q8N5M1 AC005498.2-205ENST00000593218 784 ntBASIC16.13■□□□□ 0.17
ATPAF2Q8N5M1 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATPAF2Q8N5M1 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
ATPAF2Q8N5M1 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATPAF2Q8N5M1 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ATPAF2Q8N5M1 AC009090.5-201ENST00000624886 2285 ntBASIC16.13■□□□□ 0.17
ATPAF2Q8N5M1 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ATPAF2Q8N5M1 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATPAF2Q8N5M1 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATPAF2Q8N5M1 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.13■□□□□ 0.17
ATPAF2Q8N5M1 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATPAF2Q8N5M1 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATPAF2Q8N5M1 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
ATPAF2Q8N5M1 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ATPAF2Q8N5M1 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
ATPAF2Q8N5M1 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms