Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CDKL3Q8IVW4 MIR600HG-201ENST00000449175 5984 ntBASIC16.2■□□□□ 0.18
CDKL3Q8IVW4 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDKL3Q8IVW4 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.2■□□□□ 0.18
CDKL3Q8IVW4 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CDKL3Q8IVW4 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.2■□□□□ 0.18
CDKL3Q8IVW4 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CDKL3Q8IVW4 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.2■□□□□ 0.18
CDKL3Q8IVW4 AC254562.1-201ENST00000417586 456 ntBASIC16.2■□□□□ 0.18
CDKL3Q8IVW4 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.2■□□□□ 0.18
CDKL3Q8IVW4 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.2■□□□□ 0.18
CDKL3Q8IVW4 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.2■□□□□ 0.18
CDKL3Q8IVW4 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CDKL3Q8IVW4 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CDKL3Q8IVW4 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.2■□□□□ 0.18
CDKL3Q8IVW4 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.2■□□□□ 0.18
CDKL3Q8IVW4 MIR4453-201ENST00000584019 89 ntBASIC16.2■□□□□ 0.18
CDKL3Q8IVW4 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDKL3Q8IVW4 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.2■□□□□ 0.18
CDKL3Q8IVW4 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDKL3Q8IVW4 KRT8P12-202ENST00000472924 1397 ntBASIC16.2■□□□□ 0.18
CDKL3Q8IVW4 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDKL3Q8IVW4 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.2■□□□□ 0.18
CDKL3Q8IVW4 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CDKL3Q8IVW4 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CDKL3Q8IVW4 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDKL3Q8IVW4 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDKL3Q8IVW4 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.2■□□□□ 0.18
CDKL3Q8IVW4 PCDHA3-202ENST00000532566 4594 ntBASIC16.2■□□□□ 0.18
CDKL3Q8IVW4 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
CDKL3Q8IVW4 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDKL3Q8IVW4 AC126365.1-201ENST00000578585 1514 ntBASIC16.19■□□□□ 0.18
CDKL3Q8IVW4 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.19■□□□□ 0.18
CDKL3Q8IVW4 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
CDKL3Q8IVW4 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDKL3Q8IVW4 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDKL3Q8IVW4 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDKL3Q8IVW4 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDKL3Q8IVW4 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.19■□□□□ 0.18
CDKL3Q8IVW4 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CDKL3Q8IVW4 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDKL3Q8IVW4 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDKL3Q8IVW4 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.19■□□□□ 0.18
CDKL3Q8IVW4 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDKL3Q8IVW4 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDKL3Q8IVW4 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
CDKL3Q8IVW4 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDKL3Q8IVW4 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDKL3Q8IVW4 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.19■□□□□ 0.18
CDKL3Q8IVW4 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.19■□□□□ 0.18
CDKL3Q8IVW4 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDKL3Q8IVW4 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.19■□□□□ 0.18
CDKL3Q8IVW4 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDKL3Q8IVW4 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDKL3Q8IVW4 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.19■□□□□ 0.18
CDKL3Q8IVW4 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
CDKL3Q8IVW4 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDKL3Q8IVW4 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.19■□□□□ 0.18
CDKL3Q8IVW4 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDKL3Q8IVW4 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDKL3Q8IVW4 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.19■□□□□ 0.18
CDKL3Q8IVW4 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.19■□□□□ 0.18
CDKL3Q8IVW4 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDKL3Q8IVW4 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDKL3Q8IVW4 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDKL3Q8IVW4 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDKL3Q8IVW4 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.18■□□□□ 0.18
CDKL3Q8IVW4 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDKL3Q8IVW4 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.18■□□□□ 0.18
CDKL3Q8IVW4 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CDKL3Q8IVW4 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.18■□□□□ 0.18
CDKL3Q8IVW4 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDKL3Q8IVW4 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDKL3Q8IVW4 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDKL3Q8IVW4 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.18■□□□□ 0.18
CDKL3Q8IVW4 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDKL3Q8IVW4 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CDKL3Q8IVW4 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CDKL3Q8IVW4 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDKL3Q8IVW4 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.18■□□□□ 0.18
CDKL3Q8IVW4 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDKL3Q8IVW4 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
CDKL3Q8IVW4 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDKL3Q8IVW4 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.18■□□□□ 0.18
CDKL3Q8IVW4 CNN2P11-201ENST00000429351 262 ntBASIC16.18■□□□□ 0.18
CDKL3Q8IVW4 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDKL3Q8IVW4 AP006288.1-201ENST00000446065 395 ntBASIC16.18■□□□□ 0.18
CDKL3Q8IVW4 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.18■□□□□ 0.18
CDKL3Q8IVW4 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.18■□□□□ 0.18
CDKL3Q8IVW4 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.18■□□□□ 0.18
CDKL3Q8IVW4 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.18■□□□□ 0.18
CDKL3Q8IVW4 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.18■□□□□ 0.18
CDKL3Q8IVW4 AL079307.3-201ENST00000556114 283 ntBASIC16.18■□□□□ 0.18
CDKL3Q8IVW4 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.18■□□□□ 0.18
CDKL3Q8IVW4 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CDKL3Q8IVW4 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.18■□□□□ 0.18
CDKL3Q8IVW4 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CDKL3Q8IVW4 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.18■□□□□ 0.18
CDKL3Q8IVW4 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
CDKL3Q8IVW4 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms