Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.72■□□□□ 0.27
RNF135Q8IUD6 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RNF135Q8IUD6 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.71■□□□□ 0.27
RNF135Q8IUD6 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RNF135Q8IUD6 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.71■□□□□ 0.27
RNF135Q8IUD6 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
RNF135Q8IUD6 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RNF135Q8IUD6 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.71■□□□□ 0.27
RNF135Q8IUD6 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RNF135Q8IUD6 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
RNF135Q8IUD6 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RNF135Q8IUD6 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RNF135Q8IUD6 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RNF135Q8IUD6 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
RNF135Q8IUD6 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RNF135Q8IUD6 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
RNF135Q8IUD6 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RNF135Q8IUD6 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC16.71■□□□□ 0.27
RNF135Q8IUD6 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC16.71■□□□□ 0.27
RNF135Q8IUD6 RPL28-203ENST00000428193 573 ntTSL 2 BASIC16.71■□□□□ 0.27
RNF135Q8IUD6 IGHJ2P-201ENST00000454480 60 ntBASIC16.71■□□□□ 0.27
RNF135Q8IUD6 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.71■□□□□ 0.27
RNF135Q8IUD6 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RNF135Q8IUD6 RPL28-207ENST00000558815 616 ntTSL 2 BASIC16.71■□□□□ 0.27
RNF135Q8IUD6 NIFKP4-201ENST00000567275 1192 ntBASIC16.71■□□□□ 0.27
RNF135Q8IUD6 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC16.71■□□□□ 0.27
RNF135Q8IUD6 AC025048.3-201ENST00000590609 569 ntBASIC16.71■□□□□ 0.27
RNF135Q8IUD6 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RNF135Q8IUD6 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RNF135Q8IUD6 AC091271.1-201ENST00000611877 1162 ntBASIC16.71■□□□□ 0.27
RNF135Q8IUD6 AL021578.1-201ENST00000613646 709 ntBASIC16.71■□□□□ 0.27
RNF135Q8IUD6 AC005702.4-201ENST00000618393 416 ntBASIC16.71■□□□□ 0.27
RNF135Q8IUD6 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
RNF135Q8IUD6 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RNF135Q8IUD6 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
RNF135Q8IUD6 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.71■□□□□ 0.27
RNF135Q8IUD6 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.71■□□□□ 0.27
RNF135Q8IUD6 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RNF135Q8IUD6 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RNF135Q8IUD6 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.71■□□□□ 0.27
RNF135Q8IUD6 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RNF135Q8IUD6 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RNF135Q8IUD6 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
RNF135Q8IUD6 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RNF135Q8IUD6 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RNF135Q8IUD6 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RNF135Q8IUD6 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RNF135Q8IUD6 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RNF135Q8IUD6 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC16.71■□□□□ 0.27
RNF135Q8IUD6 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
RNF135Q8IUD6 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
RNF135Q8IUD6 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.71■□□□□ 0.26
RNF135Q8IUD6 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
RNF135Q8IUD6 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
RNF135Q8IUD6 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RNF135Q8IUD6 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RNF135Q8IUD6 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.7■□□□□ 0.26
RNF135Q8IUD6 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RNF135Q8IUD6 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
RNF135Q8IUD6 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF135Q8IUD6 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF135Q8IUD6 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF135Q8IUD6 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.7■□□□□ 0.26
RNF135Q8IUD6 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF135Q8IUD6 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
RNF135Q8IUD6 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.7■□□□□ 0.26
RNF135Q8IUD6 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF135Q8IUD6 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF135Q8IUD6 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
RNF135Q8IUD6 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
RNF135Q8IUD6 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF135Q8IUD6 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF135Q8IUD6 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF135Q8IUD6 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF135Q8IUD6 AC006033.1-201ENST00000440505 426 ntBASIC16.7■□□□□ 0.26
RNF135Q8IUD6 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC16.7■□□□□ 0.26
RNF135Q8IUD6 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC16.7■□□□□ 0.26
RNF135Q8IUD6 RIT1-205ENST00000539040 919 ntTSL 2 BASIC16.7■□□□□ 0.26
RNF135Q8IUD6 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC16.7■□□□□ 0.26
RNF135Q8IUD6 AL118558.3-201ENST00000607414 1079 ntBASIC16.7■□□□□ 0.26
RNF135Q8IUD6 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC16.7■□□□□ 0.26
RNF135Q8IUD6 AC009542.2-202ENST00000619004 1067 ntBASIC16.7■□□□□ 0.26
RNF135Q8IUD6 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
RNF135Q8IUD6 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.7■□□□□ 0.26
RNF135Q8IUD6 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF135Q8IUD6 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF135Q8IUD6 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF135Q8IUD6 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF135Q8IUD6 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.7■□□□□ 0.26
RNF135Q8IUD6 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RNF135Q8IUD6 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF135Q8IUD6 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC16.7■□□□□ 0.26
RNF135Q8IUD6 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF135Q8IUD6 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RNF135Q8IUD6 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.69■□□□□ 0.26
RNF135Q8IUD6 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
RNF135Q8IUD6 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RNF135Q8IUD6 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RNF135Q8IUD6 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF135Q8IUD6 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms