Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.09□□□□□ -0.15
LRRC28Q86X40 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
LRRC28Q86X40 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LRRC28Q86X40 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LRRC28Q86X40 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LRRC28Q86X40 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LRRC28Q86X40 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LRRC28Q86X40 AC002056.1-201ENST00000395613 760 ntBASIC14.09□□□□□ -0.15
LRRC28Q86X40 HAUS4P1-201ENST00000406739 1145 ntBASIC14.09□□□□□ -0.15
LRRC28Q86X40 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LRRC28Q86X40 FAM58CP-201ENST00000435741 640 ntBASIC14.09□□□□□ -0.15
LRRC28Q86X40 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC14.09□□□□□ -0.15
LRRC28Q86X40 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC14.09□□□□□ -0.15
LRRC28Q86X40 ALG1L5P-201ENST00000482043 771 ntBASIC14.09□□□□□ -0.15
LRRC28Q86X40 AC112191.1-201ENST00000523689 701 ntBASIC14.09□□□□□ -0.15
LRRC28Q86X40 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC14.09□□□□□ -0.15
LRRC28Q86X40 AC087641.1-201ENST00000557561 1021 ntBASIC14.09□□□□□ -0.15
LRRC28Q86X40 MIR4469-201ENST00000583919 79 ntBASIC14.09□□□□□ -0.15
LRRC28Q86X40 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC14.09□□□□□ -0.15
LRRC28Q86X40 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC14.09□□□□□ -0.15
LRRC28Q86X40 AL078644.1-201ENST00000609881 752 ntBASIC14.09□□□□□ -0.15
LRRC28Q86X40 WT1-AS_2.1-201ENST00000613208 137 ntBASIC14.09□□□□□ -0.15
LRRC28Q86X40 AC091812.2-201ENST00000619081 385 ntBASIC14.09□□□□□ -0.15
LRRC28Q86X40 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
LRRC28Q86X40 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LRRC28Q86X40 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LRRC28Q86X40 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.09□□□□□ -0.15
LRRC28Q86X40 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
LRRC28Q86X40 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.09□□□□□ -0.15
LRRC28Q86X40 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
LRRC28Q86X40 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
LRRC28Q86X40 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.09□□□□□ -0.15
LRRC28Q86X40 C8orf49-201ENST00000525043 1968 ntBASIC14.09□□□□□ -0.15
LRRC28Q86X40 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LRRC28Q86X40 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LRRC28Q86X40 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LRRC28Q86X40 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LRRC28Q86X40 SBF1P1-201ENST00000444527 5631 ntBASIC14.09□□□□□ -0.15
LRRC28Q86X40 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
LRRC28Q86X40 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
LRRC28Q86X40 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
LRRC28Q86X40 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
LRRC28Q86X40 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
LRRC28Q86X40 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.08□□□□□ -0.15
LRRC28Q86X40 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
LRRC28Q86X40 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
LRRC28Q86X40 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LRRC28Q86X40 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LRRC28Q86X40 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LRRC28Q86X40 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.08□□□□□ -0.16
LRRC28Q86X40 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LRRC28Q86X40 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LRRC28Q86X40 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC14.08□□□□□ -0.16
LRRC28Q86X40 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LRRC28Q86X40 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LRRC28Q86X40 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
LRRC28Q86X40 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LRRC28Q86X40 CD82-202ENST00000342935 967 ntTSL 5 BASIC14.08□□□□□ -0.16
LRRC28Q86X40 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
LRRC28Q86X40 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC14.08□□□□□ -0.16
LRRC28Q86X40 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC14.08□□□□□ -0.16
LRRC28Q86X40 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC14.08□□□□□ -0.16
LRRC28Q86X40 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC14.08□□□□□ -0.16
LRRC28Q86X40 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14.08□□□□□ -0.16
LRRC28Q86X40 CEND1P1-201ENST00000451006 455 ntBASIC14.08□□□□□ -0.16
LRRC28Q86X40 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
LRRC28Q86X40 AC004967.1-201ENST00000453589 447 ntBASIC14.08□□□□□ -0.16
LRRC28Q86X40 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LRRC28Q86X40 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC14.08□□□□□ -0.16
LRRC28Q86X40 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC14.08□□□□□ -0.16
LRRC28Q86X40 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.08□□□□□ -0.16
LRRC28Q86X40 THTPA-204ENST00000554970 569 ntTSL 4 BASIC14.08□□□□□ -0.16
LRRC28Q86X40 THTPA-206ENST00000556015 535 ntTSL 3 BASIC14.08□□□□□ -0.16
LRRC28Q86X40 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC14.08□□□□□ -0.16
LRRC28Q86X40 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC14.08□□□□□ -0.16
LRRC28Q86X40 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC14.08□□□□□ -0.16
LRRC28Q86X40 AC134684.3-201ENST00000641758 218 ntBASIC14.08□□□□□ -0.16
LRRC28Q86X40 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LRRC28Q86X40 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LRRC28Q86X40 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
LRRC28Q86X40 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.08□□□□□ -0.16
LRRC28Q86X40 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
LRRC28Q86X40 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LRRC28Q86X40 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LRRC28Q86X40 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
LRRC28Q86X40 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LRRC28Q86X40 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LRRC28Q86X40 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LRRC28Q86X40 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LRRC28Q86X40 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LRRC28Q86X40 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
LRRC28Q86X40 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LRRC28Q86X40 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LRRC28Q86X40 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.08□□□□□ -0.16
LRRC28Q86X40 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LRRC28Q86X40 AC005912.2-201ENST00000619492 2400 ntBASIC14.07□□□□□ -0.16
LRRC28Q86X40 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.07□□□□□ -0.16
LRRC28Q86X40 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRRC28Q86X40 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRRC28Q86X40 SLC22A20-204ENST00000530038 1673 ntBASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms