Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
KCNIP4Q6PIL6 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
KCNIP4Q6PIL6 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC12.28□□□□□ -0.44
KCNIP4Q6PIL6 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC12.28□□□□□ -0.44
KCNIP4Q6PIL6 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
KCNIP4Q6PIL6 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
KCNIP4Q6PIL6 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC12.28□□□□□ -0.44
KCNIP4Q6PIL6 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC12.28□□□□□ -0.44
KCNIP4Q6PIL6 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC12.28□□□□□ -0.44
KCNIP4Q6PIL6 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
KCNIP4Q6PIL6 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC12.28□□□□□ -0.44
KCNIP4Q6PIL6 BAALC-202ENST00000306391 243 ntTSL 5 BASIC12.28□□□□□ -0.44
KCNIP4Q6PIL6 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
KCNIP4Q6PIL6 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
KCNIP4Q6PIL6 BAALC-204ENST00000330955 222 ntTSL 5 BASIC12.28□□□□□ -0.44
KCNIP4Q6PIL6 HBZP1-201ENST00000354915 429 ntBASIC12.28□□□□□ -0.44
KCNIP4Q6PIL6 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
KCNIP4Q6PIL6 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC12.28□□□□□ -0.44
KCNIP4Q6PIL6 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC12.28□□□□□ -0.44
KCNIP4Q6PIL6 NKTR-203ENST00000442970 646 ntTSL 2 BASIC12.28□□□□□ -0.44
KCNIP4Q6PIL6 GUSBP12-201ENST00000513727 720 ntBASIC12.28□□□□□ -0.44
KCNIP4Q6PIL6 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC12.28□□□□□ -0.44
KCNIP4Q6PIL6 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC12.28□□□□□ -0.44
KCNIP4Q6PIL6 AL590326.2-201ENST00000625139 305 ntBASIC12.28□□□□□ -0.44
KCNIP4Q6PIL6 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
KCNIP4Q6PIL6 TKT-201ENST00000296289 1931 ntTSL 5 BASIC12.28□□□□□ -0.44
KCNIP4Q6PIL6 HSPA7-201ENST00000445535 1927 ntBASIC12.28□□□□□ -0.44
KCNIP4Q6PIL6 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC12.28□□□□□ -0.44
KCNIP4Q6PIL6 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
KCNIP4Q6PIL6 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
KCNIP4Q6PIL6 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
KCNIP4Q6PIL6 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
KCNIP4Q6PIL6 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
KCNIP4Q6PIL6 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
KCNIP4Q6PIL6 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC12.28□□□□□ -0.44
KCNIP4Q6PIL6 TOP3BP1-201ENST00000420768 1380 ntBASIC12.28□□□□□ -0.44
KCNIP4Q6PIL6 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
KCNIP4Q6PIL6 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC12.28□□□□□ -0.44
KCNIP4Q6PIL6 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
KCNIP4Q6PIL6 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
KCNIP4Q6PIL6 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
KCNIP4Q6PIL6 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
KCNIP4Q6PIL6 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.44
KCNIP4Q6PIL6 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.44
KCNIP4Q6PIL6 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
KCNIP4Q6PIL6 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
KCNIP4Q6PIL6 TCAF1P1-201ENST00000414990 2232 ntBASIC12.27□□□□□ -0.44
KCNIP4Q6PIL6 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC12.27□□□□□ -0.44
KCNIP4Q6PIL6 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
KCNIP4Q6PIL6 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC12.27□□□□□ -0.44
KCNIP4Q6PIL6 BX640514.1-201ENST00000583223 1918 ntBASIC12.27□□□□□ -0.44
KCNIP4Q6PIL6 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
KCNIP4Q6PIL6 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
KCNIP4Q6PIL6 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
KCNIP4Q6PIL6 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.44
KCNIP4Q6PIL6 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
KCNIP4Q6PIL6 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
KCNIP4Q6PIL6 CICP8-201ENST00000455800 2813 ntBASIC12.27□□□□□ -0.44
KCNIP4Q6PIL6 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC12.27□□□□□ -0.44
KCNIP4Q6PIL6 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC12.27□□□□□ -0.44
KCNIP4Q6PIL6 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
KCNIP4Q6PIL6 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC12.27□□□□□ -0.44
KCNIP4Q6PIL6 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC12.27□□□□□ -0.45
KCNIP4Q6PIL6 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
KCNIP4Q6PIL6 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
KCNIP4Q6PIL6 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
KCNIP4Q6PIL6 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
KCNIP4Q6PIL6 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
KCNIP4Q6PIL6 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC12.27□□□□□ -0.45
KCNIP4Q6PIL6 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
KCNIP4Q6PIL6 SPDYE15P-201ENST00000424157 909 ntBASIC12.27□□□□□ -0.45
KCNIP4Q6PIL6 TMPOP1-202ENST00000424642 1267 ntBASIC12.27□□□□□ -0.45
KCNIP4Q6PIL6 WDR53-204ENST00000433160 887 ntTSL 5 BASIC12.27□□□□□ -0.45
KCNIP4Q6PIL6 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
KCNIP4Q6PIL6 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC12.27□□□□□ -0.45
KCNIP4Q6PIL6 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC12.27□□□□□ -0.45
KCNIP4Q6PIL6 VENTXP7-201ENST00000475503 772 ntBASIC12.27□□□□□ -0.45
KCNIP4Q6PIL6 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC12.27□□□□□ -0.45
KCNIP4Q6PIL6 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC12.27□□□□□ -0.45
KCNIP4Q6PIL6 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
KCNIP4Q6PIL6 AC079602.3-201ENST00000623931 403 ntBASIC12.27□□□□□ -0.45
KCNIP4Q6PIL6 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
KCNIP4Q6PIL6 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
KCNIP4Q6PIL6 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
KCNIP4Q6PIL6 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC12.27□□□□□ -0.45
KCNIP4Q6PIL6 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
KCNIP4Q6PIL6 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
KCNIP4Q6PIL6 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
KCNIP4Q6PIL6 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
KCNIP4Q6PIL6 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
KCNIP4Q6PIL6 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
KCNIP4Q6PIL6 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
KCNIP4Q6PIL6 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
KCNIP4Q6PIL6 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
KCNIP4Q6PIL6 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
KCNIP4Q6PIL6 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
KCNIP4Q6PIL6 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
KCNIP4Q6PIL6 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
KCNIP4Q6PIL6 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
KCNIP4Q6PIL6 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms