Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
C11orf88Q6PI97 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
C11orf88Q6PI97 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC13.86□□□□□ -0.19
C11orf88Q6PI97 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
C11orf88Q6PI97 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
C11orf88Q6PI97 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC13.86□□□□□ -0.19
C11orf88Q6PI97 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
C11orf88Q6PI97 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
C11orf88Q6PI97 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
C11orf88Q6PI97 UCKL1-AS1-201ENST00000623569 3602 ntBASIC13.85□□□□□ -0.19
C11orf88Q6PI97 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
C11orf88Q6PI97 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
C11orf88Q6PI97 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
C11orf88Q6PI97 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC13.85□□□□□ -0.19
C11orf88Q6PI97 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
C11orf88Q6PI97 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC13.85□□□□□ -0.19
C11orf88Q6PI97 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
C11orf88Q6PI97 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
C11orf88Q6PI97 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
C11orf88Q6PI97 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
C11orf88Q6PI97 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
C11orf88Q6PI97 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
C11orf88Q6PI97 POLL-206ENST00000370172 2308 ntTSL 2 BASIC13.85□□□□□ -0.19
C11orf88Q6PI97 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
C11orf88Q6PI97 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
C11orf88Q6PI97 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC13.85□□□□□ -0.19
C11orf88Q6PI97 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
C11orf88Q6PI97 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC13.85□□□□□ -0.19
C11orf88Q6PI97 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC13.85□□□□□ -0.19
C11orf88Q6PI97 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC13.85□□□□□ -0.19
C11orf88Q6PI97 KRT18P3-201ENST00000451602 1288 ntBASIC13.85□□□□□ -0.19
C11orf88Q6PI97 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
C11orf88Q6PI97 RNA5SP415-201ENST00000517246 115 ntBASIC13.85□□□□□ -0.19
C11orf88Q6PI97 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC13.85□□□□□ -0.19
C11orf88Q6PI97 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC13.85□□□□□ -0.19
C11orf88Q6PI97 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
C11orf88Q6PI97 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC13.85□□□□□ -0.19
C11orf88Q6PI97 PAM16-208ENST00000573553 722 ntTSL 2 BASIC13.85□□□□□ -0.19
C11orf88Q6PI97 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC13.85□□□□□ -0.19
C11orf88Q6PI97 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
C11orf88Q6PI97 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC13.85□□□□□ -0.19
C11orf88Q6PI97 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
C11orf88Q6PI97 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
C11orf88Q6PI97 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
C11orf88Q6PI97 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
C11orf88Q6PI97 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC13.85□□□□□ -0.19
C11orf88Q6PI97 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
C11orf88Q6PI97 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
C11orf88Q6PI97 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
C11orf88Q6PI97 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC13.85□□□□□ -0.19
C11orf88Q6PI97 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
C11orf88Q6PI97 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
C11orf88Q6PI97 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
C11orf88Q6PI97 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC13.85□□□□□ -0.19
C11orf88Q6PI97 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
C11orf88Q6PI97 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC13.85□□□□□ -0.19
C11orf88Q6PI97 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
C11orf88Q6PI97 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
C11orf88Q6PI97 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
C11orf88Q6PI97 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
C11orf88Q6PI97 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
C11orf88Q6PI97 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
C11orf88Q6PI97 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
C11orf88Q6PI97 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.84□□□□□ -0.19
C11orf88Q6PI97 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
C11orf88Q6PI97 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC13.84□□□□□ -0.19
C11orf88Q6PI97 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC13.84□□□□□ -0.19
C11orf88Q6PI97 AC069224.1-201ENST00000566372 1715 ntBASIC13.84□□□□□ -0.19
C11orf88Q6PI97 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
C11orf88Q6PI97 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
C11orf88Q6PI97 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
C11orf88Q6PI97 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
C11orf88Q6PI97 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC13.84□□□□□ -0.19
C11orf88Q6PI97 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
C11orf88Q6PI97 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
C11orf88Q6PI97 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
C11orf88Q6PI97 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
C11orf88Q6PI97 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
C11orf88Q6PI97 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
C11orf88Q6PI97 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
C11orf88Q6PI97 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
C11orf88Q6PI97 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
C11orf88Q6PI97 MIR648-201ENST00000385046 94 ntBASIC13.84□□□□□ -0.19
C11orf88Q6PI97 MIR940-201ENST00000401276 94 ntBASIC13.84□□□□□ -0.19
C11orf88Q6PI97 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC13.84□□□□□ -0.19
C11orf88Q6PI97 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC13.84□□□□□ -0.19
C11orf88Q6PI97 HS6ST1P1-201ENST00000481504 1234 ntBASIC13.84□□□□□ -0.19
C11orf88Q6PI97 S100A2-206ENST00000497140 697 ntTSL 2 BASIC13.84□□□□□ -0.19
C11orf88Q6PI97 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC13.84□□□□□ -0.19
C11orf88Q6PI97 AC136632.2-201ENST00000512891 861 ntBASIC13.84□□□□□ -0.19
C11orf88Q6PI97 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC13.84□□□□□ -0.19
C11orf88Q6PI97 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
C11orf88Q6PI97 AC034105.1-201ENST00000563488 319 ntBASIC13.84□□□□□ -0.19
C11orf88Q6PI97 MIR3687-2-201ENST00000577708 61 ntBASIC13.84□□□□□ -0.19
C11orf88Q6PI97 AL356488.2-201ENST00000602755 427 ntBASIC13.84□□□□□ -0.19
C11orf88Q6PI97 MIR3687-1-201ENST00000614492 61 ntBASIC13.84□□□□□ -0.19
C11orf88Q6PI97 AC079781.4-201ENST00000641908 219 ntBASIC13.84□□□□□ -0.19
C11orf88Q6PI97 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC13.84□□□□□ -0.19
C11orf88Q6PI97 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
C11orf88Q6PI97 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms