Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.44■□□□□ 0.22
RFWD3Q6PCD5 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.44■□□□□ 0.22
RFWD3Q6PCD5 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RFWD3Q6PCD5 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
RFWD3Q6PCD5 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.44■□□□□ 0.22
RFWD3Q6PCD5 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.44■□□□□ 0.22
RFWD3Q6PCD5 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
RFWD3Q6PCD5 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.44■□□□□ 0.22
RFWD3Q6PCD5 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RFWD3Q6PCD5 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.44■□□□□ 0.22
RFWD3Q6PCD5 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
RFWD3Q6PCD5 SPDYE19P-201ENST00000338590 713 ntBASIC16.44■□□□□ 0.22
RFWD3Q6PCD5 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RFWD3Q6PCD5 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RFWD3Q6PCD5 DOC2GP-202ENST00000514950 1163 ntBASIC16.44■□□□□ 0.22
RFWD3Q6PCD5 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.44■□□□□ 0.22
RFWD3Q6PCD5 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RFWD3Q6PCD5 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.44■□□□□ 0.22
RFWD3Q6PCD5 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC16.44■□□□□ 0.22
RFWD3Q6PCD5 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.44■□□□□ 0.22
RFWD3Q6PCD5 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
RFWD3Q6PCD5 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RFWD3Q6PCD5 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RFWD3Q6PCD5 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.44■□□□□ 0.22
RFWD3Q6PCD5 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
RFWD3Q6PCD5 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.44■□□□□ 0.22
RFWD3Q6PCD5 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.44■□□□□ 0.22
RFWD3Q6PCD5 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RFWD3Q6PCD5 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
RFWD3Q6PCD5 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
RFWD3Q6PCD5 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RFWD3Q6PCD5 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.43■□□□□ 0.22
RFWD3Q6PCD5 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFWD3Q6PCD5 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFWD3Q6PCD5 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
RFWD3Q6PCD5 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFWD3Q6PCD5 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RFWD3Q6PCD5 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFWD3Q6PCD5 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFWD3Q6PCD5 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
RFWD3Q6PCD5 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFWD3Q6PCD5 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFWD3Q6PCD5 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.43■□□□□ 0.22
RFWD3Q6PCD5 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC16.43■□□□□ 0.22
RFWD3Q6PCD5 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.43■□□□□ 0.22
RFWD3Q6PCD5 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.43■□□□□ 0.22
RFWD3Q6PCD5 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16.43■□□□□ 0.22
RFWD3Q6PCD5 AC190387.1-201ENST00000551683 408 ntBASIC16.43■□□□□ 0.22
RFWD3Q6PCD5 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.43■□□□□ 0.22
RFWD3Q6PCD5 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RFWD3Q6PCD5 AL132655.2-201ENST00000596276 594 ntBASIC16.43■□□□□ 0.22
RFWD3Q6PCD5 SRD5A3P1-201ENST00000603021 949 ntBASIC16.43■□□□□ 0.22
RFWD3Q6PCD5 LINC01115-203ENST00000606068 577 ntBASIC16.43■□□□□ 0.22
RFWD3Q6PCD5 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFWD3Q6PCD5 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.43■□□□□ 0.22
RFWD3Q6PCD5 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFWD3Q6PCD5 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
RFWD3Q6PCD5 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
RFWD3Q6PCD5 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFWD3Q6PCD5 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFWD3Q6PCD5 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RFWD3Q6PCD5 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.43■□□□□ 0.22
RFWD3Q6PCD5 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RFWD3Q6PCD5 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC16.42■□□□□ 0.22
RFWD3Q6PCD5 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RFWD3Q6PCD5 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RFWD3Q6PCD5 AC007541.1-201ENST00000570282 1469 ntBASIC16.42■□□□□ 0.22
RFWD3Q6PCD5 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.42■□□□□ 0.22
RFWD3Q6PCD5 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.42■□□□□ 0.22
RFWD3Q6PCD5 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RFWD3Q6PCD5 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.42■□□□□ 0.22
RFWD3Q6PCD5 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
RFWD3Q6PCD5 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RFWD3Q6PCD5 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
RFWD3Q6PCD5 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RFWD3Q6PCD5 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.42■□□□□ 0.22
RFWD3Q6PCD5 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RFWD3Q6PCD5 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RFWD3Q6PCD5 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.42■□□□□ 0.22
RFWD3Q6PCD5 PIN1P1-201ENST00000412108 996 ntBASIC16.42■□□□□ 0.22
RFWD3Q6PCD5 AC015922.1-201ENST00000421102 1152 ntBASIC16.42■□□□□ 0.22
RFWD3Q6PCD5 CRB3P1-201ENST00000449338 276 ntBASIC16.42■□□□□ 0.22
RFWD3Q6PCD5 PHKG1P2-201ENST00000457537 863 ntBASIC16.42■□□□□ 0.22
RFWD3Q6PCD5 TAF8-206ENST00000472818 719 ntTSL 2 BASIC16.42■□□□□ 0.22
RFWD3Q6PCD5 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RFWD3Q6PCD5 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RFWD3Q6PCD5 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RFWD3Q6PCD5 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC16.42■□□□□ 0.22
RFWD3Q6PCD5 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC16.42■□□□□ 0.22
RFWD3Q6PCD5 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.42■□□□□ 0.22
RFWD3Q6PCD5 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC16.42■□□□□ 0.22
RFWD3Q6PCD5 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.42■□□□□ 0.22
RFWD3Q6PCD5 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC16.42■□□□□ 0.22
RFWD3Q6PCD5 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.42■□□□□ 0.22
RFWD3Q6PCD5 AC074044.1-201ENST00000609673 707 ntBASIC16.42■□□□□ 0.22
RFWD3Q6PCD5 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RFWD3Q6PCD5 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.42■□□□□ 0.22
RFWD3Q6PCD5 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16.42■□□□□ 0.22
RFWD3Q6PCD5 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RFWD3Q6PCD5 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms