Protein–RNA interactions for Protein: Q6DN03

HIST2H2BC, Putative histone H2B type 2-C, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2BCQ6DN03 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST2H2BCQ6DN03 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HIST2H2BCQ6DN03 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HIST2H2BCQ6DN03 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HIST2H2BCQ6DN03 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HIST2H2BCQ6DN03 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HIST2H2BCQ6DN03 AC136604.1-201ENST00000418535 575 ntBASIC13.28□□□□□ -0.28
HIST2H2BCQ6DN03 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HIST2H2BCQ6DN03 CHMP1AP1-201ENST00000445563 662 ntBASIC13.28□□□□□ -0.28
HIST2H2BCQ6DN03 AC018463.1-201ENST00000456674 917 ntBASIC13.28□□□□□ -0.28
HIST2H2BCQ6DN03 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC13.28□□□□□ -0.28
HIST2H2BCQ6DN03 POU5F1P6-201ENST00000466990 990 ntBASIC13.28□□□□□ -0.28
HIST2H2BCQ6DN03 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST2H2BCQ6DN03 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC13.28□□□□□ -0.28
HIST2H2BCQ6DN03 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC13.28□□□□□ -0.28
HIST2H2BCQ6DN03 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC13.28□□□□□ -0.28
HIST2H2BCQ6DN03 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC13.28□□□□□ -0.28
HIST2H2BCQ6DN03 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC13.28□□□□□ -0.28
HIST2H2BCQ6DN03 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC13.28□□□□□ -0.28
HIST2H2BCQ6DN03 DNM1P30-201ENST00000563586 452 ntBASIC13.28□□□□□ -0.28
HIST2H2BCQ6DN03 AC027139.1-201ENST00000565286 951 ntBASIC13.28□□□□□ -0.28
HIST2H2BCQ6DN03 RPL17P45-201ENST00000586289 509 ntBASIC13.28□□□□□ -0.28
HIST2H2BCQ6DN03 AL592295.3-201ENST00000637155 863 ntTSL 5 BASIC13.28□□□□□ -0.28
HIST2H2BCQ6DN03 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HIST2H2BCQ6DN03 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST2H2BCQ6DN03 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
HIST2H2BCQ6DN03 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HIST2H2BCQ6DN03 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC13.28□□□□□ -0.28
HIST2H2BCQ6DN03 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST2H2BCQ6DN03 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC13.28□□□□□ -0.28
HIST2H2BCQ6DN03 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
HIST2H2BCQ6DN03 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST2H2BCQ6DN03 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST2H2BCQ6DN03 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
HIST2H2BCQ6DN03 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST2H2BCQ6DN03 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST2H2BCQ6DN03 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST2H2BCQ6DN03 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC13.28□□□□□ -0.28
HIST2H2BCQ6DN03 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC13.28□□□□□ -0.28
HIST2H2BCQ6DN03 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
HIST2H2BCQ6DN03 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
HIST2H2BCQ6DN03 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC13.27□□□□□ -0.28
HIST2H2BCQ6DN03 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
HIST2H2BCQ6DN03 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC13.27□□□□□ -0.28
HIST2H2BCQ6DN03 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
HIST2H2BCQ6DN03 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
HIST2H2BCQ6DN03 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
HIST2H2BCQ6DN03 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
HIST2H2BCQ6DN03 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
HIST2H2BCQ6DN03 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
HIST2H2BCQ6DN03 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
HIST2H2BCQ6DN03 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
HIST2H2BCQ6DN03 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC13.27□□□□□ -0.28
HIST2H2BCQ6DN03 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
HIST2H2BCQ6DN03 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC13.27□□□□□ -0.29
HIST2H2BCQ6DN03 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC13.27□□□□□ -0.29
HIST2H2BCQ6DN03 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
HIST2H2BCQ6DN03 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
HIST2H2BCQ6DN03 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
HIST2H2BCQ6DN03 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
HIST2H2BCQ6DN03 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC13.27□□□□□ -0.29
HIST2H2BCQ6DN03 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC13.27□□□□□ -0.29
HIST2H2BCQ6DN03 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.27□□□□□ -0.29
HIST2H2BCQ6DN03 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC13.27□□□□□ -0.29
HIST2H2BCQ6DN03 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
HIST2H2BCQ6DN03 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC13.27□□□□□ -0.29
HIST2H2BCQ6DN03 MIR5196-201ENST00000578146 115 ntBASIC13.27□□□□□ -0.29
HIST2H2BCQ6DN03 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC13.27□□□□□ -0.29
HIST2H2BCQ6DN03 AC097359.3-201ENST00000603982 1210 ntBASIC13.27□□□□□ -0.29
HIST2H2BCQ6DN03 AC090164.2-201ENST00000611487 516 ntBASIC13.27□□□□□ -0.29
HIST2H2BCQ6DN03 ZACNP1-201ENST00000612259 710 ntBASIC13.27□□□□□ -0.29
HIST2H2BCQ6DN03 AC018695.6-201ENST00000614011 534 ntBASIC13.27□□□□□ -0.29
HIST2H2BCQ6DN03 MIR6858-201ENST00000620733 67 ntBASIC13.27□□□□□ -0.29
HIST2H2BCQ6DN03 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.27□□□□□ -0.29
HIST2H2BCQ6DN03 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC13.27□□□□□ -0.29
HIST2H2BCQ6DN03 MME-218ENST00000625667 363 ntTSL 5 BASIC13.27□□□□□ -0.29
HIST2H2BCQ6DN03 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
HIST2H2BCQ6DN03 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
HIST2H2BCQ6DN03 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC13.27□□□□□ -0.29
HIST2H2BCQ6DN03 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
HIST2H2BCQ6DN03 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC13.27□□□□□ -0.29
HIST2H2BCQ6DN03 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HIST2H2BCQ6DN03 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.27□□□□□ -0.29
HIST2H2BCQ6DN03 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
HIST2H2BCQ6DN03 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
HIST2H2BCQ6DN03 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HIST2H2BCQ6DN03 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HIST2H2BCQ6DN03 PCDHB18P-201ENST00000524813 2368 ntBASIC13.27□□□□□ -0.29
HIST2H2BCQ6DN03 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
HIST2H2BCQ6DN03 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC13.26□□□□□ -0.29
HIST2H2BCQ6DN03 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC13.26□□□□□ -0.29
HIST2H2BCQ6DN03 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HIST2H2BCQ6DN03 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
HIST2H2BCQ6DN03 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HIST2H2BCQ6DN03 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HIST2H2BCQ6DN03 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC13.26□□□□□ -0.29
HIST2H2BCQ6DN03 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
HIST2H2BCQ6DN03 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HIST2H2BCQ6DN03 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
HIST2H2BCQ6DN03 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms