Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRC38Q5VT99 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
LRRC38Q5VT99 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LRRC38Q5VT99 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRC38Q5VT99 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.32■□□□□ 0.2
LRRC38Q5VT99 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
LRRC38Q5VT99 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.32■□□□□ 0.2
LRRC38Q5VT99 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC16.32■□□□□ 0.2
LRRC38Q5VT99 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LRRC38Q5VT99 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.32■□□□□ 0.2
LRRC38Q5VT99 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LRRC38Q5VT99 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.32■□□□□ 0.2
LRRC38Q5VT99 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRC38Q5VT99 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRC38Q5VT99 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.32■□□□□ 0.2
LRRC38Q5VT99 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.32■□□□□ 0.2
LRRC38Q5VT99 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.32■□□□□ 0.2
LRRC38Q5VT99 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.32■□□□□ 0.2
LRRC38Q5VT99 AC027612.4-201ENST00000605371 583 ntBASIC16.32■□□□□ 0.2
LRRC38Q5VT99 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC16.32■□□□□ 0.2
LRRC38Q5VT99 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRC38Q5VT99 AMT-224ENST00000635808 1610 ntTSL 5 BASIC16.32■□□□□ 0.2
LRRC38Q5VT99 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRC38Q5VT99 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRC38Q5VT99 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRC38Q5VT99 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRC38Q5VT99 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRC38Q5VT99 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.32■□□□□ 0.2
LRRC38Q5VT99 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRC38Q5VT99 MARS-233ENST00000628866 2583 ntTSL 5 BASIC16.32■□□□□ 0.2
LRRC38Q5VT99 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC38Q5VT99 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC38Q5VT99 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC38Q5VT99 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
LRRC38Q5VT99 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.31■□□□□ 0.2
LRRC38Q5VT99 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC38Q5VT99 GPI-205ENST00000586425 1799 ntTSL 5 BASIC16.31■□□□□ 0.2
LRRC38Q5VT99 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC38Q5VT99 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
LRRC38Q5VT99 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC38Q5VT99 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.31■□□□□ 0.2
LRRC38Q5VT99 WASH3P-207ENST00000560956 1394 ntBASIC16.31■□□□□ 0.2
LRRC38Q5VT99 FO538757.1-201ENST00000623083 1397 ntBASIC16.31■□□□□ 0.2
LRRC38Q5VT99 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.31■□□□□ 0.2
LRRC38Q5VT99 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC38Q5VT99 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC38Q5VT99 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC38Q5VT99 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
LRRC38Q5VT99 RPL37AP1-201ENST00000412502 279 ntBASIC16.31■□□□□ 0.2
LRRC38Q5VT99 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.31■□□□□ 0.2
LRRC38Q5VT99 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.31■□□□□ 0.2
LRRC38Q5VT99 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.31■□□□□ 0.2
LRRC38Q5VT99 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC38Q5VT99 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC38Q5VT99 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.31■□□□□ 0.2
LRRC38Q5VT99 AC015910.1-201ENST00000579400 975 ntBASIC16.31■□□□□ 0.2
LRRC38Q5VT99 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.31■□□□□ 0.2
LRRC38Q5VT99 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.31■□□□□ 0.2
LRRC38Q5VT99 AC134684.3-201ENST00000641758 218 ntBASIC16.31■□□□□ 0.2
LRRC38Q5VT99 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC16.31■□□□□ 0.2
LRRC38Q5VT99 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC38Q5VT99 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC38Q5VT99 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC38Q5VT99 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC38Q5VT99 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC38Q5VT99 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC38Q5VT99 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC16.31■□□□□ 0.2
LRRC38Q5VT99 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC38Q5VT99 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC38Q5VT99 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC38Q5VT99 ZBED1P1-201ENST00000502364 1930 ntBASIC16.31■□□□□ 0.2
LRRC38Q5VT99 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC38Q5VT99 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.31■□□□□ 0.2
LRRC38Q5VT99 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC16.31■□□□□ 0.2
LRRC38Q5VT99 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC38Q5VT99 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC38Q5VT99 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC38Q5VT99 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC38Q5VT99 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC38Q5VT99 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.3■□□□□ 0.2
LRRC38Q5VT99 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC38Q5VT99 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC38Q5VT99 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC38Q5VT99 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.3■□□□□ 0.2
LRRC38Q5VT99 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.3■□□□□ 0.2
LRRC38Q5VT99 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC38Q5VT99 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC38Q5VT99 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC38Q5VT99 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC38Q5VT99 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
LRRC38Q5VT99 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.3■□□□□ 0.2
LRRC38Q5VT99 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC38Q5VT99 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
LRRC38Q5VT99 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.3■□□□□ 0.2
LRRC38Q5VT99 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC38Q5VT99 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC38Q5VT99 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC38Q5VT99 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC38Q5VT99 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
LRRC38Q5VT99 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms