Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
FAM78BQ5VT40 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC12.59□□□□□ -0.39
FAM78BQ5VT40 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC12.59□□□□□ -0.39
FAM78BQ5VT40 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
FAM78BQ5VT40 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
FAM78BQ5VT40 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC12.59□□□□□ -0.39
FAM78BQ5VT40 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
FAM78BQ5VT40 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
FAM78BQ5VT40 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
FAM78BQ5VT40 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC12.59□□□□□ -0.39
FAM78BQ5VT40 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
FAM78BQ5VT40 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
FAM78BQ5VT40 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
FAM78BQ5VT40 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
FAM78BQ5VT40 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
FAM78BQ5VT40 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
FAM78BQ5VT40 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
FAM78BQ5VT40 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
FAM78BQ5VT40 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
FAM78BQ5VT40 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
FAM78BQ5VT40 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
FAM78BQ5VT40 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC12.59□□□□□ -0.39
FAM78BQ5VT40 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
FAM78BQ5VT40 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
FAM78BQ5VT40 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
FAM78BQ5VT40 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
FAM78BQ5VT40 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
FAM78BQ5VT40 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
FAM78BQ5VT40 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
FAM78BQ5VT40 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
FAM78BQ5VT40 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
FAM78BQ5VT40 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
FAM78BQ5VT40 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
FAM78BQ5VT40 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC12.59□□□□□ -0.39
FAM78BQ5VT40 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
FAM78BQ5VT40 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC12.58□□□□□ -0.39
FAM78BQ5VT40 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC12.58□□□□□ -0.39
FAM78BQ5VT40 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
FAM78BQ5VT40 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.39
FAM78BQ5VT40 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
FAM78BQ5VT40 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
FAM78BQ5VT40 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC12.58□□□□□ -0.4
FAM78BQ5VT40 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC12.58□□□□□ -0.4
FAM78BQ5VT40 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
FAM78BQ5VT40 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
FAM78BQ5VT40 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC12.58□□□□□ -0.4
FAM78BQ5VT40 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC12.58□□□□□ -0.4
FAM78BQ5VT40 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
FAM78BQ5VT40 AC005912.2-201ENST00000619492 2400 ntBASIC12.58□□□□□ -0.4
FAM78BQ5VT40 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
FAM78BQ5VT40 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
FAM78BQ5VT40 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
FAM78BQ5VT40 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
FAM78BQ5VT40 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
FAM78BQ5VT40 AC004870.1-201ENST00000315132 882 ntBASIC12.58□□□□□ -0.4
FAM78BQ5VT40 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
FAM78BQ5VT40 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
FAM78BQ5VT40 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
FAM78BQ5VT40 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
FAM78BQ5VT40 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
FAM78BQ5VT40 AL450487.1-201ENST00000426799 995 ntBASIC12.58□□□□□ -0.4
FAM78BQ5VT40 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
FAM78BQ5VT40 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC12.58□□□□□ -0.4
FAM78BQ5VT40 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC12.58□□□□□ -0.4
FAM78BQ5VT40 AF186996.4-201ENST00000467186 377 ntBASIC12.58□□□□□ -0.4
FAM78BQ5VT40 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC12.58□□□□□ -0.4
FAM78BQ5VT40 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC12.58□□□□□ -0.4
FAM78BQ5VT40 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC12.58□□□□□ -0.4
FAM78BQ5VT40 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC12.58□□□□□ -0.4
FAM78BQ5VT40 AC091951.1-201ENST00000512854 2465 ntBASIC12.58□□□□□ -0.4
FAM78BQ5VT40 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC12.58□□□□□ -0.4
FAM78BQ5VT40 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC12.58□□□□□ -0.4
FAM78BQ5VT40 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC12.58□□□□□ -0.4
FAM78BQ5VT40 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC12.58□□□□□ -0.4
FAM78BQ5VT40 RN7SL510P-201ENST00000581311 263 ntBASIC12.58□□□□□ -0.4
FAM78BQ5VT40 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC12.58□□□□□ -0.4
FAM78BQ5VT40 IRF5-214ENST00000613821 595 ntTSL 5 BASIC12.58□□□□□ -0.4
FAM78BQ5VT40 TP73-AS1-207ENST00000624167 988 ntBASIC12.58□□□□□ -0.4
FAM78BQ5VT40 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
FAM78BQ5VT40 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC12.58□□□□□ -0.4
FAM78BQ5VT40 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC12.58□□□□□ -0.4
FAM78BQ5VT40 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
FAM78BQ5VT40 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
FAM78BQ5VT40 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC12.58□□□□□ -0.4
FAM78BQ5VT40 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
FAM78BQ5VT40 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
FAM78BQ5VT40 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC12.58□□□□□ -0.4
FAM78BQ5VT40 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC12.58□□□□□ -0.4
FAM78BQ5VT40 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC12.58□□□□□ -0.4
FAM78BQ5VT40 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
FAM78BQ5VT40 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
FAM78BQ5VT40 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
FAM78BQ5VT40 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
FAM78BQ5VT40 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
FAM78BQ5VT40 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
FAM78BQ5VT40 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
FAM78BQ5VT40 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
FAM78BQ5VT40 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC12.58□□□□□ -0.4
FAM78BQ5VT40 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
FAM78BQ5VT40 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms