Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ATPAF1Q5TC12 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC13.75□□□□□ -0.21
ATPAF1Q5TC12 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC13.75□□□□□ -0.21
ATPAF1Q5TC12 AC023511.2-201ENST00000618803 211 ntBASIC13.75□□□□□ -0.21
ATPAF1Q5TC12 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC13.75□□□□□ -0.21
ATPAF1Q5TC12 AC105339.1-204ENST00000636249 355 ntBASIC13.75□□□□□ -0.21
ATPAF1Q5TC12 LINC01101-201ENST00000622953 1884 ntBASIC13.75□□□□□ -0.21
ATPAF1Q5TC12 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ATPAF1Q5TC12 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ATPAF1Q5TC12 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
ATPAF1Q5TC12 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC13.75□□□□□ -0.21
ATPAF1Q5TC12 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
ATPAF1Q5TC12 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.75□□□□□ -0.21
ATPAF1Q5TC12 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.75□□□□□ -0.21
ATPAF1Q5TC12 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ATPAF1Q5TC12 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ATPAF1Q5TC12 AC005089.1-201ENST00000619486 2241 ntBASIC13.75□□□□□ -0.21
ATPAF1Q5TC12 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
ATPAF1Q5TC12 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ATPAF1Q5TC12 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
ATPAF1Q5TC12 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
ATPAF1Q5TC12 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ATPAF1Q5TC12 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ATPAF1Q5TC12 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC13.74□□□□□ -0.21
ATPAF1Q5TC12 AL592424.1-201ENST00000563624 1536 ntBASIC13.74□□□□□ -0.21
ATPAF1Q5TC12 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
ATPAF1Q5TC12 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ATPAF1Q5TC12 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
ATPAF1Q5TC12 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
ATPAF1Q5TC12 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
ATPAF1Q5TC12 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC13.74□□□□□ -0.21
ATPAF1Q5TC12 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ATPAF1Q5TC12 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
ATPAF1Q5TC12 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
ATPAF1Q5TC12 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ATPAF1Q5TC12 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC13.74□□□□□ -0.21
ATPAF1Q5TC12 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC13.74□□□□□ -0.21
ATPAF1Q5TC12 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
ATPAF1Q5TC12 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ATPAF1Q5TC12 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.74□□□□□ -0.21
ATPAF1Q5TC12 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ATPAF1Q5TC12 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC13.74□□□□□ -0.21
ATPAF1Q5TC12 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ATPAF1Q5TC12 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ATPAF1Q5TC12 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
ATPAF1Q5TC12 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC13.74□□□□□ -0.21
ATPAF1Q5TC12 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ATPAF1Q5TC12 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ATPAF1Q5TC12 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC13.74□□□□□ -0.21
ATPAF1Q5TC12 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC13.74□□□□□ -0.21
ATPAF1Q5TC12 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
ATPAF1Q5TC12 AC093724.1-201ENST00000448659 1027 ntBASIC13.74□□□□□ -0.21
ATPAF1Q5TC12 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC13.74□□□□□ -0.21
ATPAF1Q5TC12 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC13.74□□□□□ -0.21
ATPAF1Q5TC12 DHDH-204ENST00000523250 634 ntTSL 5 BASIC13.74□□□□□ -0.21
ATPAF1Q5TC12 PUS1-205ENST00000535067 838 ntTSL 3 BASIC13.74□□□□□ -0.21
ATPAF1Q5TC12 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC13.74□□□□□ -0.21
ATPAF1Q5TC12 LINC01225-203ENST00000563550 1244 ntBASIC13.74□□□□□ -0.21
ATPAF1Q5TC12 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC13.74□□□□□ -0.21
ATPAF1Q5TC12 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC13.74□□□□□ -0.21
ATPAF1Q5TC12 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC13.74□□□□□ -0.21
ATPAF1Q5TC12 AC084121.4-201ENST00000641598 221 ntBASIC13.74□□□□□ -0.21
ATPAF1Q5TC12 AF228730.8-201ENST00000642140 221 ntBASIC13.74□□□□□ -0.21
ATPAF1Q5TC12 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
ATPAF1Q5TC12 POR-201ENST00000394893 2532 ntTSL 5 BASIC13.74□□□□□ -0.21
ATPAF1Q5TC12 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
ATPAF1Q5TC12 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ATPAF1Q5TC12 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ATPAF1Q5TC12 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
ATPAF1Q5TC12 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC13.74□□□□□ -0.21
ATPAF1Q5TC12 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
ATPAF1Q5TC12 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC13.74□□□□□ -0.21
ATPAF1Q5TC12 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ATPAF1Q5TC12 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ATPAF1Q5TC12 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ATPAF1Q5TC12 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC13.74□□□□□ -0.21
ATPAF1Q5TC12 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
ATPAF1Q5TC12 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ATPAF1Q5TC12 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ATPAF1Q5TC12 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC13.74□□□□□ -0.21
ATPAF1Q5TC12 AC073439.1-201ENST00000624121 1774 ntBASIC13.73□□□□□ -0.21
ATPAF1Q5TC12 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
ATPAF1Q5TC12 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ATPAF1Q5TC12 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC13.73□□□□□ -0.21
ATPAF1Q5TC12 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ATPAF1Q5TC12 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ATPAF1Q5TC12 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
ATPAF1Q5TC12 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ATPAF1Q5TC12 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC13.73□□□□□ -0.21
ATPAF1Q5TC12 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
ATPAF1Q5TC12 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ATPAF1Q5TC12 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
ATPAF1Q5TC12 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ATPAF1Q5TC12 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ATPAF1Q5TC12 AL359258.3-201ENST00000622910 2331 ntBASIC13.73□□□□□ -0.21
ATPAF1Q5TC12 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
ATPAF1Q5TC12 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ATPAF1Q5TC12 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
ATPAF1Q5TC12 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC13.73□□□□□ -0.21
ATPAF1Q5TC12 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms