Protein–RNA interactions for Protein: Q53S08

RAB6C, Rab6C, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6CQ53S08 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
RAB6CQ53S08 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RAB6CQ53S08 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.33■□□□□ 0.21
RAB6CQ53S08 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RAB6CQ53S08 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
RAB6CQ53S08 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.21
RAB6CQ53S08 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RAB6CQ53S08 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.21
RAB6CQ53S08 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAB6CQ53S08 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
RAB6CQ53S08 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAB6CQ53S08 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAB6CQ53S08 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAB6CQ53S08 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.33■□□□□ 0.2
RAB6CQ53S08 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RAB6CQ53S08 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAB6CQ53S08 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.33■□□□□ 0.2
RAB6CQ53S08 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAB6CQ53S08 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.33■□□□□ 0.2
RAB6CQ53S08 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.33■□□□□ 0.2
RAB6CQ53S08 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RAB6CQ53S08 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.33■□□□□ 0.2
RAB6CQ53S08 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.33■□□□□ 0.2
RAB6CQ53S08 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.33■□□□□ 0.2
RAB6CQ53S08 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.33■□□□□ 0.2
RAB6CQ53S08 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAB6CQ53S08 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC16.33■□□□□ 0.2
RAB6CQ53S08 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAB6CQ53S08 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.33■□□□□ 0.2
RAB6CQ53S08 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
RAB6CQ53S08 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RAB6CQ53S08 AC006486.2-201ENST00000624246 2199 ntBASIC16.33■□□□□ 0.2
RAB6CQ53S08 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RAB6CQ53S08 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC16.33■□□□□ 0.2
RAB6CQ53S08 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB6CQ53S08 CICP11-201ENST00000434745 2827 ntBASIC16.32■□□□□ 0.2
RAB6CQ53S08 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB6CQ53S08 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.32■□□□□ 0.2
RAB6CQ53S08 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB6CQ53S08 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.32■□□□□ 0.2
RAB6CQ53S08 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.32■□□□□ 0.2
RAB6CQ53S08 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.32■□□□□ 0.2
RAB6CQ53S08 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB6CQ53S08 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16.32■□□□□ 0.2
RAB6CQ53S08 AL512638.1-201ENST00000457493 794 ntBASIC16.32■□□□□ 0.2
RAB6CQ53S08 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC16.32■□□□□ 0.2
RAB6CQ53S08 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB6CQ53S08 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC16.32■□□□□ 0.2
RAB6CQ53S08 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC16.32■□□□□ 0.2
RAB6CQ53S08 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
RAB6CQ53S08 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.32■□□□□ 0.2
RAB6CQ53S08 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.32■□□□□ 0.2
RAB6CQ53S08 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.32■□□□□ 0.2
RAB6CQ53S08 SRD5A3P1-201ENST00000603021 949 ntBASIC16.32■□□□□ 0.2
RAB6CQ53S08 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.32■□□□□ 0.2
RAB6CQ53S08 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.32■□□□□ 0.2
RAB6CQ53S08 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.32■□□□□ 0.2
RAB6CQ53S08 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.32■□□□□ 0.2
RAB6CQ53S08 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
RAB6CQ53S08 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RAB6CQ53S08 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
RAB6CQ53S08 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
RAB6CQ53S08 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB6CQ53S08 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB6CQ53S08 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB6CQ53S08 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
RAB6CQ53S08 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RAB6CQ53S08 ZEB1-AS1-208ENST00000607166 2503 ntBASIC16.32■□□□□ 0.2
RAB6CQ53S08 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.32■□□□□ 0.2
RAB6CQ53S08 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.31■□□□□ 0.2
RAB6CQ53S08 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB6CQ53S08 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC16.31■□□□□ 0.2
RAB6CQ53S08 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
RAB6CQ53S08 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB6CQ53S08 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC16.31■□□□□ 0.2
RAB6CQ53S08 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC16.31■□□□□ 0.2
RAB6CQ53S08 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC16.31■□□□□ 0.2
RAB6CQ53S08 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.31■□□□□ 0.2
RAB6CQ53S08 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB6CQ53S08 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.31■□□□□ 0.2
RAB6CQ53S08 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.31■□□□□ 0.2
RAB6CQ53S08 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RAB6CQ53S08 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RAB6CQ53S08 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB6CQ53S08 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
RAB6CQ53S08 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB6CQ53S08 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RAB6CQ53S08 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB6CQ53S08 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RAB6CQ53S08 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC16.31■□□□□ 0.2
RAB6CQ53S08 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.31■□□□□ 0.2
RAB6CQ53S08 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.31■□□□□ 0.2
RAB6CQ53S08 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.31■□□□□ 0.2
RAB6CQ53S08 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
RAB6CQ53S08 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.31■□□□□ 0.2
RAB6CQ53S08 AC092337.1-201ENST00000568699 1129 ntBASIC16.31■□□□□ 0.2
RAB6CQ53S08 AL391069.4-201ENST00000609583 481 ntBASIC16.31■□□□□ 0.2
RAB6CQ53S08 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RAB6CQ53S08 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB6CQ53S08 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms