Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
KHDC1Q4VXA5 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16■□□□□ 0.15
KHDC1Q4VXA5 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
KHDC1Q4VXA5 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
KHDC1Q4VXA5 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
KHDC1Q4VXA5 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16■□□□□ 0.15
KHDC1Q4VXA5 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16■□□□□ 0.15
KHDC1Q4VXA5 NORAD-201ENST00000565493 5339 ntBASIC16■□□□□ 0.15
KHDC1Q4VXA5 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16■□□□□ 0.15
KHDC1Q4VXA5 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
KHDC1Q4VXA5 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
KHDC1Q4VXA5 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
KHDC1Q4VXA5 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
KHDC1Q4VXA5 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.99■□□□□ 0.15
KHDC1Q4VXA5 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC15.99■□□□□ 0.15
KHDC1Q4VXA5 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
KHDC1Q4VXA5 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC15.99■□□□□ 0.15
KHDC1Q4VXA5 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
KHDC1Q4VXA5 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
KHDC1Q4VXA5 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC15.99■□□□□ 0.15
KHDC1Q4VXA5 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
KHDC1Q4VXA5 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.99■□□□□ 0.15
KHDC1Q4VXA5 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
KHDC1Q4VXA5 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.99■□□□□ 0.15
KHDC1Q4VXA5 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
KHDC1Q4VXA5 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
KHDC1Q4VXA5 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
KHDC1Q4VXA5 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
KHDC1Q4VXA5 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
KHDC1Q4VXA5 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
KHDC1Q4VXA5 AC107890.1-201ENST00000422478 521 ntBASIC15.99■□□□□ 0.15
KHDC1Q4VXA5 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC15.99■□□□□ 0.15
KHDC1Q4VXA5 SATB1-217ENST00000493952 626 ntTSL 3 BASIC15.99■□□□□ 0.15
KHDC1Q4VXA5 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC15.99■□□□□ 0.15
KHDC1Q4VXA5 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.99■□□□□ 0.15
KHDC1Q4VXA5 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC15.99■□□□□ 0.15
KHDC1Q4VXA5 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC15.99■□□□□ 0.15
KHDC1Q4VXA5 COQ4-205ENST00000609948 956 ntTSL 2 BASIC15.99■□□□□ 0.15
KHDC1Q4VXA5 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
KHDC1Q4VXA5 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
KHDC1Q4VXA5 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.99■□□□□ 0.15
KHDC1Q4VXA5 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
KHDC1Q4VXA5 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
KHDC1Q4VXA5 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.99■□□□□ 0.15
KHDC1Q4VXA5 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC15.99■□□□□ 0.15
KHDC1Q4VXA5 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
KHDC1Q4VXA5 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
KHDC1Q4VXA5 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
KHDC1Q4VXA5 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
KHDC1Q4VXA5 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.99■□□□□ 0.15
KHDC1Q4VXA5 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
KHDC1Q4VXA5 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
KHDC1Q4VXA5 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
KHDC1Q4VXA5 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
KHDC1Q4VXA5 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
KHDC1Q4VXA5 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC15.98■□□□□ 0.15
KHDC1Q4VXA5 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
KHDC1Q4VXA5 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
KHDC1Q4VXA5 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
KHDC1Q4VXA5 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
KHDC1Q4VXA5 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
KHDC1Q4VXA5 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
KHDC1Q4VXA5 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
KHDC1Q4VXA5 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
KHDC1Q4VXA5 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
KHDC1Q4VXA5 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
KHDC1Q4VXA5 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC15.98■□□□□ 0.15
KHDC1Q4VXA5 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
KHDC1Q4VXA5 BAD-202ENST00000394531 631 ntTSL 3 BASIC15.98■□□□□ 0.15
KHDC1Q4VXA5 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC15.98■□□□□ 0.15
KHDC1Q4VXA5 TREML5P-201ENST00000421694 576 ntBASIC15.98■□□□□ 0.15
KHDC1Q4VXA5 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC15.98■□□□□ 0.15
KHDC1Q4VXA5 MTND6P24-201ENST00000440466 518 ntBASIC15.98■□□□□ 0.15
KHDC1Q4VXA5 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC15.98■□□□□ 0.15
KHDC1Q4VXA5 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC15.98■□□□□ 0.15
KHDC1Q4VXA5 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.98■□□□□ 0.15
KHDC1Q4VXA5 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
KHDC1Q4VXA5 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.98■□□□□ 0.15
KHDC1Q4VXA5 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC15.98■□□□□ 0.15
KHDC1Q4VXA5 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC15.98■□□□□ 0.15
KHDC1Q4VXA5 BAD-207ENST00000544785 525 ntTSL 3 BASIC15.98■□□□□ 0.15
KHDC1Q4VXA5 LITAF-210ENST00000571976 548 ntTSL 2 BASIC15.98■□□□□ 0.15
KHDC1Q4VXA5 LITAF-214ENST00000574703 486 ntTSL 2 BASIC15.98■□□□□ 0.15
KHDC1Q4VXA5 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC15.98■□□□□ 0.15
KHDC1Q4VXA5 AC005498.2-205ENST00000593218 784 ntBASIC15.98■□□□□ 0.15
KHDC1Q4VXA5 RN7SL828P-201ENST00000607615 303 ntBASIC15.98■□□□□ 0.15
KHDC1Q4VXA5 SPDYE12P-201ENST00000618416 771 ntBASIC15.98■□□□□ 0.15
KHDC1Q4VXA5 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
KHDC1Q4VXA5 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC15.98■□□□□ 0.15
KHDC1Q4VXA5 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
KHDC1Q4VXA5 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.98■□□□□ 0.15
KHDC1Q4VXA5 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
KHDC1Q4VXA5 AC007292.2-201ENST00000593524 1812 ntBASIC15.98■□□□□ 0.15
KHDC1Q4VXA5 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
KHDC1Q4VXA5 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
KHDC1Q4VXA5 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
KHDC1Q4VXA5 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
KHDC1Q4VXA5 FO538757.1-201ENST00000623083 1397 ntBASIC15.98■□□□□ 0.15
KHDC1Q4VXA5 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
KHDC1Q4VXA5 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms