Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTC1Q2NKJ3 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTC1Q2NKJ3 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC16.79■□□□□ 0.28
CTC1Q2NKJ3 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.79■□□□□ 0.28
CTC1Q2NKJ3 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTC1Q2NKJ3 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CTC1Q2NKJ3 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CTC1Q2NKJ3 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.79■□□□□ 0.28
CTC1Q2NKJ3 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.79■□□□□ 0.28
CTC1Q2NKJ3 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CTC1Q2NKJ3 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTC1Q2NKJ3 SOCS2P1-201ENST00000417727 557 ntBASIC16.79■□□□□ 0.28
CTC1Q2NKJ3 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTC1Q2NKJ3 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
CTC1Q2NKJ3 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTC1Q2NKJ3 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CTC1Q2NKJ3 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC16.79■□□□□ 0.28
CTC1Q2NKJ3 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC16.79■□□□□ 0.28
CTC1Q2NKJ3 AC009486.1-201ENST00000569860 813 ntBASIC16.79■□□□□ 0.28
CTC1Q2NKJ3 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC16.79■□□□□ 0.28
CTC1Q2NKJ3 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.79■□□□□ 0.28
CTC1Q2NKJ3 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
CTC1Q2NKJ3 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
CTC1Q2NKJ3 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC16.79■□□□□ 0.28
CTC1Q2NKJ3 RHOXF1P1-202ENST00000635473 501 ntBASIC16.79■□□□□ 0.28
CTC1Q2NKJ3 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.79■□□□□ 0.28
CTC1Q2NKJ3 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTC1Q2NKJ3 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.79■□□□□ 0.28
CTC1Q2NKJ3 U82695.1-201ENST00000635752 1889 ntBASIC16.79■□□□□ 0.28
CTC1Q2NKJ3 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CTC1Q2NKJ3 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.79■□□□□ 0.28
CTC1Q2NKJ3 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CTC1Q2NKJ3 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTC1Q2NKJ3 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.79■□□□□ 0.28
CTC1Q2NKJ3 INTS4P2-202ENST00000614726 2019 ntBASIC16.79■□□□□ 0.28
CTC1Q2NKJ3 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.79■□□□□ 0.28
CTC1Q2NKJ3 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTC1Q2NKJ3 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.78■□□□□ 0.28
CTC1Q2NKJ3 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTC1Q2NKJ3 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTC1Q2NKJ3 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTC1Q2NKJ3 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTC1Q2NKJ3 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CTC1Q2NKJ3 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.78■□□□□ 0.28
CTC1Q2NKJ3 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CTC1Q2NKJ3 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CTC1Q2NKJ3 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTC1Q2NKJ3 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CTC1Q2NKJ3 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTC1Q2NKJ3 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CTC1Q2NKJ3 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.78■□□□□ 0.28
CTC1Q2NKJ3 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTC1Q2NKJ3 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CTC1Q2NKJ3 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTC1Q2NKJ3 TPO-206ENST00000382269 1155 ntTSL 5 BASIC16.78■□□□□ 0.28
CTC1Q2NKJ3 AC074338.1-201ENST00000416825 156 ntBASIC16.78■□□□□ 0.28
CTC1Q2NKJ3 CALR4P-201ENST00000431943 946 ntBASIC16.78■□□□□ 0.28
CTC1Q2NKJ3 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC16.78■□□□□ 0.28
CTC1Q2NKJ3 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC16.78■□□□□ 0.28
CTC1Q2NKJ3 AC012441.1-201ENST00000446669 685 ntBASIC16.78■□□□□ 0.28
CTC1Q2NKJ3 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC16.78■□□□□ 0.28
CTC1Q2NKJ3 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CTC1Q2NKJ3 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC16.78■□□□□ 0.28
CTC1Q2NKJ3 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CTC1Q2NKJ3 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CTC1Q2NKJ3 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC16.78■□□□□ 0.28
CTC1Q2NKJ3 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC16.78■□□□□ 0.28
CTC1Q2NKJ3 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC16.78■□□□□ 0.28
CTC1Q2NKJ3 AP002490.2-201ENST00000524791 560 ntBASIC16.78■□□□□ 0.28
CTC1Q2NKJ3 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CTC1Q2NKJ3 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC16.78■□□□□ 0.28
CTC1Q2NKJ3 COG4-212ENST00000564653 590 ntTSL 5 BASIC16.78■□□□□ 0.28
CTC1Q2NKJ3 AL118558.3-201ENST00000607414 1079 ntBASIC16.78■□□□□ 0.28
CTC1Q2NKJ3 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CTC1Q2NKJ3 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CTC1Q2NKJ3 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.78■□□□□ 0.28
CTC1Q2NKJ3 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.78■□□□□ 0.28
CTC1Q2NKJ3 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CTC1Q2NKJ3 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CTC1Q2NKJ3 AC144831.1-201ENST00000573312 2656 ntBASIC16.78■□□□□ 0.28
CTC1Q2NKJ3 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTC1Q2NKJ3 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTC1Q2NKJ3 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.78■□□□□ 0.28
CTC1Q2NKJ3 AL645728.1-201ENST00000366221 2101 ntBASIC16.78■□□□□ 0.28
CTC1Q2NKJ3 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTC1Q2NKJ3 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTC1Q2NKJ3 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.77■□□□□ 0.28
CTC1Q2NKJ3 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
CTC1Q2NKJ3 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTC1Q2NKJ3 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTC1Q2NKJ3 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.77■□□□□ 0.28
CTC1Q2NKJ3 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTC1Q2NKJ3 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTC1Q2NKJ3 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTC1Q2NKJ3 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTC1Q2NKJ3 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTC1Q2NKJ3 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CTC1Q2NKJ3 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CTC1Q2NKJ3 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CTC1Q2NKJ3 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms