Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC15.11■□□□□ 0.01
RSPO4Q2I0M5 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC15.11■□□□□ 0.01
RSPO4Q2I0M5 GMFG-209ENST00000600322 622 ntTSL 5 BASIC15.11■□□□□ 0.01
RSPO4Q2I0M5 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC15.11■□□□□ 0.01
RSPO4Q2I0M5 AL805961.1-203ENST00000641078 1258 ntBASIC15.11■□□□□ 0.01
RSPO4Q2I0M5 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RSPO4Q2I0M5 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RSPO4Q2I0M5 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RSPO4Q2I0M5 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RSPO4Q2I0M5 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RSPO4Q2I0M5 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RSPO4Q2I0M5 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RSPO4Q2I0M5 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RSPO4Q2I0M5 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
RSPO4Q2I0M5 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC15.11■□□□□ 0.01
RSPO4Q2I0M5 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RSPO4Q2I0M5 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
RSPO4Q2I0M5 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RSPO4Q2I0M5 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
RSPO4Q2I0M5 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC15.11■□□□□ 0.01
RSPO4Q2I0M5 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.1■□□□□ 0.01
RSPO4Q2I0M5 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC15.1■□□□□ 0.01
RSPO4Q2I0M5 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RSPO4Q2I0M5 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RSPO4Q2I0M5 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RSPO4Q2I0M5 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RSPO4Q2I0M5 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
RSPO4Q2I0M5 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RSPO4Q2I0M5 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
RSPO4Q2I0M5 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.1■□□□□ 0.01
RSPO4Q2I0M5 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC15.1■□□□□ 0.01
RSPO4Q2I0M5 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RSPO4Q2I0M5 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC15.1■□□□□ 0.01
RSPO4Q2I0M5 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RSPO4Q2I0M5 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RSPO4Q2I0M5 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.1■□□□□ 0.01
RSPO4Q2I0M5 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC15.1■□□□□ 0.01
RSPO4Q2I0M5 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC15.1■□□□□ 0.01
RSPO4Q2I0M5 AC021723.1-201ENST00000486306 515 ntBASIC15.1■□□□□ 0.01
RSPO4Q2I0M5 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC15.1■□□□□ 0.01
RSPO4Q2I0M5 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
RSPO4Q2I0M5 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC15.1■□□□□ 0.01
RSPO4Q2I0M5 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
RSPO4Q2I0M5 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC15.1■□□□□ 0.01
RSPO4Q2I0M5 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RSPO4Q2I0M5 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.1■□□□□ 0.01
RSPO4Q2I0M5 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RSPO4Q2I0M5 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RSPO4Q2I0M5 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.1■□□□□ 0.01
RSPO4Q2I0M5 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RSPO4Q2I0M5 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RSPO4Q2I0M5 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RSPO4Q2I0M5 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC15.1■□□□□ 0.01
RSPO4Q2I0M5 AD000864.1-201ENST00000624076 2295 ntBASIC15.1■□□□□ 0.01
RSPO4Q2I0M5 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RSPO4Q2I0M5 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RSPO4Q2I0M5 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RSPO4Q2I0M5 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
RSPO4Q2I0M5 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC15.1■□□□□ 0.01
RSPO4Q2I0M5 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC15.1■□□□□ 0.01
RSPO4Q2I0M5 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
RSPO4Q2I0M5 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
RSPO4Q2I0M5 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RSPO4Q2I0M5 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.09■□□□□ 0.01
RSPO4Q2I0M5 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RSPO4Q2I0M5 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RSPO4Q2I0M5 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RSPO4Q2I0M5 TP73-209ENST00000603362 1668 ntTSL 5 BASIC15.09■□□□□ 0.01
RSPO4Q2I0M5 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
RSPO4Q2I0M5 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RSPO4Q2I0M5 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RSPO4Q2I0M5 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RSPO4Q2I0M5 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RSPO4Q2I0M5 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RSPO4Q2I0M5 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RSPO4Q2I0M5 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.09■□□□□ 0.01
RSPO4Q2I0M5 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC15.09■□□□□ 0.01
RSPO4Q2I0M5 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
RSPO4Q2I0M5 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
RSPO4Q2I0M5 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
RSPO4Q2I0M5 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RSPO4Q2I0M5 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC15.09■□□□□ 0.01
RSPO4Q2I0M5 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RSPO4Q2I0M5 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.09■□□□□ 0.01
RSPO4Q2I0M5 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC15.09■□□□□ 0.01
RSPO4Q2I0M5 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RSPO4Q2I0M5 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RSPO4Q2I0M5 SLC16A6P1-201ENST00000413214 1059 ntBASIC15.09■□□□□ 0.01
RSPO4Q2I0M5 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC15.09■□□□□ 0.01
RSPO4Q2I0M5 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC15.09■□□□□ 0.01
RSPO4Q2I0M5 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
RSPO4Q2I0M5 AL353637.1-201ENST00000451571 732 ntBASIC15.09■□□□□ 0.01
RSPO4Q2I0M5 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RSPO4Q2I0M5 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC15.09■□□□□ 0.01
RSPO4Q2I0M5 RPL18P13-201ENST00000478088 569 ntBASIC15.09■□□□□ 0.01
RSPO4Q2I0M5 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC15.09■□□□□ 0.01
RSPO4Q2I0M5 AC106794.1-201ENST00000506935 792 ntBASIC15.09■□□□□ 0.01
RSPO4Q2I0M5 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
RSPO4Q2I0M5 RN7SL48P-201ENST00000579283 293 ntBASIC15.09■□□□□ 0.01
RSPO4Q2I0M5 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms