Protein–RNA interactions for Protein: Q05901

CHRNB3, Neuronal acetylcholine receptor subunit beta-3, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3Q05901 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHRNB3Q05901 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
CHRNB3Q05901 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
CHRNB3Q05901 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHRNB3Q05901 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
CHRNB3Q05901 AC104109.2-201ENST00000602919 1418 ntBASIC14.99□□□□□ -0.01
CHRNB3Q05901 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHRNB3Q05901 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.99□□□□□ -0.01
CHRNB3Q05901 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CHRNB3Q05901 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CHRNB3Q05901 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CHRNB3Q05901 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHRNB3Q05901 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CHRNB3Q05901 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHRNB3Q05901 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.98□□□□□ -0.01
CHRNB3Q05901 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
CHRNB3Q05901 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CHRNB3Q05901 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHRNB3Q05901 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHRNB3Q05901 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CHRNB3Q05901 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.98□□□□□ -0.01
CHRNB3Q05901 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.98□□□□□ -0.01
CHRNB3Q05901 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CHRNB3Q05901 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CHRNB3Q05901 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CHRNB3Q05901 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CHRNB3Q05901 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHRNB3Q05901 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CHRNB3Q05901 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CHRNB3Q05901 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHRNB3Q05901 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHRNB3Q05901 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHRNB3Q05901 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CHRNB3Q05901 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.98□□□□□ -0.01
CHRNB3Q05901 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.98□□□□□ -0.01
CHRNB3Q05901 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHRNB3Q05901 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC14.98□□□□□ -0.01
CHRNB3Q05901 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
CHRNB3Q05901 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHRNB3Q05901 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
CHRNB3Q05901 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC14.98□□□□□ -0.01
CHRNB3Q05901 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC14.98□□□□□ -0.01
CHRNB3Q05901 FAM185BP-201ENST00000443595 716 ntBASIC14.98□□□□□ -0.01
CHRNB3Q05901 HS6ST1P1-201ENST00000481504 1234 ntBASIC14.98□□□□□ -0.01
CHRNB3Q05901 KRT18P34-201ENST00000488218 1270 ntBASIC14.98□□□□□ -0.01
CHRNB3Q05901 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.98□□□□□ -0.01
CHRNB3Q05901 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CHRNB3Q05901 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHRNB3Q05901 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC14.98□□□□□ -0.01
CHRNB3Q05901 Z83851.2-201ENST00000609564 659 ntBASIC14.98□□□□□ -0.01
CHRNB3Q05901 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC14.98□□□□□ -0.01
CHRNB3Q05901 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
CHRNB3Q05901 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHRNB3Q05901 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC14.98□□□□□ -0.01
CHRNB3Q05901 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
CHRNB3Q05901 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.98□□□□□ -0.01
CHRNB3Q05901 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
CHRNB3Q05901 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CHRNB3Q05901 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHRNB3Q05901 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHRNB3Q05901 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
CHRNB3Q05901 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CHRNB3Q05901 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHRNB3Q05901 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CHRNB3Q05901 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHRNB3Q05901 AC009090.5-201ENST00000624886 2285 ntBASIC14.97□□□□□ -0.01
CHRNB3Q05901 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
CHRNB3Q05901 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CHRNB3Q05901 LINC00552-201ENST00000625151 2579 ntBASIC14.97□□□□□ -0.01
CHRNB3Q05901 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.97□□□□□ -0.01
CHRNB3Q05901 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.97□□□□□ -0.01
CHRNB3Q05901 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CHRNB3Q05901 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
CHRNB3Q05901 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CHRNB3Q05901 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
CHRNB3Q05901 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHRNB3Q05901 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
CHRNB3Q05901 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CHRNB3Q05901 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHRNB3Q05901 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
CHRNB3Q05901 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHRNB3Q05901 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHRNB3Q05901 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.97□□□□□ -0.01
CHRNB3Q05901 METTL26-205ENST00000397666 726 ntTSL 2 BASIC14.97□□□□□ -0.01
CHRNB3Q05901 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC14.97□□□□□ -0.01
CHRNB3Q05901 POLD2P1-201ENST00000511220 997 ntBASIC14.97□□□□□ -0.01
CHRNB3Q05901 RNA5SP415-201ENST00000517246 115 ntBASIC14.97□□□□□ -0.01
CHRNB3Q05901 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.97□□□□□ -0.01
CHRNB3Q05901 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC14.97□□□□□ -0.01
CHRNB3Q05901 CIPC-205ENST00000555437 566 ntTSL 3 BASIC14.97□□□□□ -0.01
CHRNB3Q05901 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.97□□□□□ -0.01
CHRNB3Q05901 AL031432.2-201ENST00000566714 459 ntBASIC14.97□□□□□ -0.01
CHRNB3Q05901 AL928711.1-201ENST00000570165 459 ntBASIC14.97□□□□□ -0.01
CHRNB3Q05901 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC14.97□□□□□ -0.01
CHRNB3Q05901 AL356488.2-201ENST00000602755 427 ntBASIC14.97□□□□□ -0.01
CHRNB3Q05901 ACTL9-202ENST00000612068 1252 ntBASIC14.97□□□□□ -0.01
CHRNB3Q05901 AL645728.2-201ENST00000641974 660 ntBASIC14.97□□□□□ -0.01
CHRNB3Q05901 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHRNB3Q05901 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHRNB3Q05901 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms