Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.75□□□□□ -0.05
CDH12P55289 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDH12P55289 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.75□□□□□ -0.05
CDH12P55289 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CDH12P55289 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.75□□□□□ -0.05
CDH12P55289 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.75□□□□□ -0.05
CDH12P55289 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDH12P55289 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDH12P55289 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH12P55289 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CDH12P55289 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH12P55289 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH12P55289 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
CDH12P55289 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH12P55289 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.74□□□□□ -0.05
CDH12P55289 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CDH12P55289 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CDH12P55289 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH12P55289 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH12P55289 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.74□□□□□ -0.05
CDH12P55289 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH12P55289 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH12P55289 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH12P55289 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CDH12P55289 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CDH12P55289 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CDH12P55289 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.74□□□□□ -0.05
CDH12P55289 AC023274.1-201ENST00000418278 595 ntBASIC14.74□□□□□ -0.05
CDH12P55289 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC14.74□□□□□ -0.05
CDH12P55289 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC14.74□□□□□ -0.05
CDH12P55289 AC098859.1-201ENST00000502915 1238 ntBASIC14.74□□□□□ -0.05
CDH12P55289 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH12P55289 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
CDH12P55289 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
CDH12P55289 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.74□□□□□ -0.05
CDH12P55289 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.74□□□□□ -0.05
CDH12P55289 AC091812.2-201ENST00000619081 385 ntBASIC14.74□□□□□ -0.05
CDH12P55289 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC14.74□□□□□ -0.05
CDH12P55289 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.74□□□□□ -0.05
CDH12P55289 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.74□□□□□ -0.05
CDH12P55289 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CDH12P55289 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH12P55289 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH12P55289 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.74□□□□□ -0.05
CDH12P55289 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.74□□□□□ -0.05
CDH12P55289 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.74□□□□□ -0.05
CDH12P55289 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CDH12P55289 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CDH12P55289 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.74□□□□□ -0.05
CDH12P55289 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
CDH12P55289 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CDH12P55289 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH12P55289 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDH12P55289 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.73□□□□□ -0.05
CDH12P55289 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
CDH12P55289 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDH12P55289 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.73□□□□□ -0.05
CDH12P55289 AKAP8P1-201ENST00000434743 1349 ntBASIC14.73□□□□□ -0.05
CDH12P55289 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CDH12P55289 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDH12P55289 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.73□□□□□ -0.05
CDH12P55289 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.73□□□□□ -0.05
CDH12P55289 FOXO1B-201ENST00000504678 1527 ntBASIC14.73□□□□□ -0.05
CDH12P55289 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
CDH12P55289 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.73□□□□□ -0.05
CDH12P55289 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.73□□□□□ -0.05
CDH12P55289 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.73□□□□□ -0.05
CDH12P55289 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.73□□□□□ -0.05
CDH12P55289 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDH12P55289 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDH12P55289 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.73□□□□□ -0.05
CDH12P55289 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
CDH12P55289 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDH12P55289 AL355306.1-201ENST00000415580 579 ntBASIC14.73□□□□□ -0.05
CDH12P55289 AC026396.1-201ENST00000419388 421 ntBASIC14.73□□□□□ -0.05
CDH12P55289 AL671277.1-201ENST00000429656 993 ntBASIC14.73□□□□□ -0.05
CDH12P55289 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CDH12P55289 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CDH12P55289 AC105233.2-201ENST00000523697 349 ntBASIC14.73□□□□□ -0.05
CDH12P55289 AF228730.5-201ENST00000530288 346 ntBASIC14.73□□□□□ -0.05
CDH12P55289 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
CDH12P55289 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.73□□□□□ -0.05
CDH12P55289 COX5A-206ENST00000568783 571 ntTSL 3 BASIC14.73□□□□□ -0.05
CDH12P55289 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.73□□□□□ -0.05
CDH12P55289 SPTSSB-204ENST00000617024 1292 ntBASIC14.73□□□□□ -0.05
CDH12P55289 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.73□□□□□ -0.05
CDH12P55289 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDH12P55289 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.73□□□□□ -0.05
CDH12P55289 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDH12P55289 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDH12P55289 AC007686.3-201ENST00000619017 3487 ntBASIC14.73□□□□□ -0.05
CDH12P55289 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.73□□□□□ -0.05
CDH12P55289 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CDH12P55289 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDH12P55289 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDH12P55289 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDH12P55289 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
CDH12P55289 CICP23-201ENST00000605013 2741 ntBASIC14.72□□□□□ -0.05
CDH12P55289 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH12P55289 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms